RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 IGDCC4Q8TDY8 1250 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 HMGB4Q8WW32 186 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 RUFY2Q8WXA3 655 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 RSC1A1Q92681 617 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 JAKMIP2Q96AA8 810 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 VPS33AQ96AX1 596 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 LENG1Q96BZ8 264 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 GRAMD1AQ96CP6 724 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 KTI12Q96EK9 354 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 ZNF845Q96IR2 970 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 FAM84AQ96KN4 292 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 WDR92Q96MX6 357 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 PWWP2AQ96N64 755 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 NR1H4Q96RI1 486 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 FAM83CQ9BQN1 747 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 CPEB1Q9BZB8 566 aaKnown RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 EDEM3Q9BZQ6 932 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 FAM129AQ9BZQ8 928 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 KLHL4Q9C0H6 718 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 TINAGL1Q9GZM7 467 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 RANBP17Q9H2T7 1088 aaKnown RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 MUC13Q9H3R2 512 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 C7orf69Q9H7B7 122 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 LRRC4CQ9HCJ2 640 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 ZBTB26Q9HCK0 441 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 SEMA4BQ9NPR2 832 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 PDRG1Q9NUG6 133 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 USP40Q9NVE5 1235 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 HCFC1R1Q9NWW0 138 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 TRMT1Q9NXH9 659 aaKnown RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 TAS2R10Q9NYW0 307 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 PLA2G3Q9NZ20 509 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 DNMT3BQ9UBC3 853 aaKnown RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 SAE1Q9UBE0 346 aaPredicted RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 NXF1Q9UBU9 619 aaKnown RBP2.81□□□□□ -1.96
HMHB1-202ENST00000638299 KNSTRNQ9Y448 316 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 PLEKHM1Q9Y4G2 1056 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 TAF6LQ9Y6J9 622 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 KDM3AQ9Y4C1 1321 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 ZMYM3Q14202 1370 aa2.81□□□□□ -1.96
HMHB1-202ENST00000638299 FER1L4A9Z1Z3 1794 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 OR2W5A6NFC9 320 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 URADA6NGE7 173 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 BTBD18B2RXH4 712 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 E9PLN8 166 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 M0QYT0 321 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 SYN3O14994 580 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 DCLK1O15075 740 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TNFSF14O43557 240 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 DYRK3O43781 588 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 RRP9O43818 475 aaKnown RBP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TSPAN3O60637 253 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 FMO6PO60774 539 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 DIAPH2O60879 1101 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 SRGAP2O75044 1071 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 VPS4BO75351 444 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 PIAS2O75928 621 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 ALDH1A2O94788 518 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 HEXIM1O94992 359 aaKnown RBP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 PDE8BO95263 885 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 SLU7O95391 586 aaKnown RBP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 VIPP01282 170 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 GNAI2P04899 355 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 CHGBP05060 677 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TUBBP07437 444 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 THEGLP0DJG4 465 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 PIM1P11309 404 aaPredicted RBP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 SELLP14151 372 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 STMN1P16949 149 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 FDXRP22570 491 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 ATP5DP30049 168 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 THPOP40225 353 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 PBX3P40426 434 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 RAD23AP54725 363 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 FAM3BP58499 235 aaPredicted RBP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 RBP5P82980 135 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 UBXN1Q04323 297 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TFCP2Q12800 502 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 SF3A3Q12874 501 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 MYO1EQ12965 1108 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 GPS1Q13098 491 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 ADAM15Q13444 863 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 ATP1A4Q13733 1029 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 PUM1Q14671 1186 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 KCNB1Q14721 858 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 NFIXQ14938 502 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 ZNF674Q2M3X9 581 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 PTCHD3Q3KNS1 767 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TIGD5Q53EQ6 642 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 KRTCAP3Q53RY4 240 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 GARNL3Q5VVW2 1013 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TRIM68Q6AZZ1 485 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 VASNQ6EMK4 673 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 ABLIM2Q6H8Q1 611 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TMEM132EQ6IEE7 984 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TTI2Q6NXR4 508 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 TAF2Q6P1X5 1199 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 INTS5Q6P9B9 1019 aaKnown RBP2.8□□□□□ -1.96
HMHB1-202ENST00000638299 CASC1Q6TDU7 716 aa2.8□□□□□ -1.96
HMHB1-202ENST00000638299 SEM1Q6ZVN7 128 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms