RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 OR6B3Q8NGW1 331 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
CLN8-214ENST00000637594 CGRRF1Q99675 332 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 TPSD1Q9BZJ3 242 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 CFAP97Q9P2B7 532 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 MBD1Q9UIS9 605 aaPredicted RBP9.36□□□□□ -0.91
CLN8-214ENST00000637594 PILRBQ9UKJ0 227 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 MTMR6Q9Y217 621 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 ATG2BQ96BY7 2078 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 UBE4BO95155 1302 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 PVALEFA0A1B0GWK0 134 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 FAM221BA6H8Z2 402 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 A8MXQ7 604 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 PATE3B3GLJ2 98 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 MAP3K13O43283 966 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 COCHO43405 550 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 GREM1O60565 184 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 KLF8O95600 359 aaPredicted RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 MBL2P11226 248 aaPredicted RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 ADH5P11766 374 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 KCNA4P22459 653 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 TIE1P35590 1138 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 DHPSP49366 369 aaPredicted RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 MYL6P60660 151 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 TNNC1P63316 161 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 BMT2Q1RMZ1 405 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 LY6G5CQ5SRR4 150 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 UNQ6494/PRO21346Q6UXR6 183 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 HTR3DQ70Z44 454 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 TRMT11Q7Z4G4 463 aaKnown RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 C12orf40Q86WS4 652 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 SFTPA1Q8IWL2 248 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 CRYBG2Q8N1P7 616 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 PDILTQ8N807 584 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 RDH13Q8NBN7 331 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 CEP76Q8TAP6 659 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 NOC3LQ8WTT2 800 aaKnown RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 SCFD1Q8WVM8 642 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 PIGKQ92643 395 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 SYAP1Q96A49 352 aaPredicted RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 SPACA7Q96KW9 195 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 NUSAP1Q9BXS6 441 aaKnown RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 MAGEF1Q9HAY2 307 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 CSNK1G1Q9HCP0 422 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 ARHGEF4Q9NR80 690 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 TMEM74BQ9NUR3 256 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 CHORDC1Q9UHD1 332 aaPredicted RBP9.35□□□□□ -0.91
CLN8-214ENST00000637594 LAMA1P25391 3075 aa9.35□□□□□ -0.91
CLN8-214ENST00000637594 ABCA7Q8IZY2 2146 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 CNOT1A5YKK6 2376 aaKnown RBP9.34□□□□□ -0.91
CLN8-214ENST00000637594 KIAA1549LQ6ZVL6 1849 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 TBC1D3BA6NDS4 549 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 C1QTNF9BB2RNN3 333 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 CLDN5O00501 218 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 SPTLC2O15270 562 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 ABL1P00519 1130 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 C4BPAP04003 597 aaKnown RBP9.34□□□□□ -0.91
CLN8-214ENST00000637594 C1QTNF9P0C862 333 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 DLATP10515 647 aaKnown RBP9.34□□□□□ -0.91
CLN8-214ENST00000637594 PTGER3P43115 390 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 SEMA3BQ13214 749 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 TRPC3Q13507 836 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 KNOP1Q1ED39 458 aaKnown RBP9.34□□□□□ -0.91
CLN8-214ENST00000637594 TRIM61Q5EBN2 209 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 SLC36A4Q6YBV0 504 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 RABEPKQ7Z6M1 372 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 FRMD1Q8N878 549 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 SCAMP5Q8TAC9 235 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 RLN3Q8WXF3 142 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 GATA6Q92908 595 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 FBXO32Q969P5 355 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 TNIP3Q96KP6 325 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 CD248Q9HCU0 757 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 SPHK2Q9NRA0 654 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 DMAC2Q9NW81 257 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 SMPD4Q9NXE4 827 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 DEC1Q9P2X7 70 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 HCN2Q9UL51 889 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 ZMIZ1Q9ULJ6 1067 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 CFAP47Q6ZTR5 3102 aa9.34□□□□□ -0.91
CLN8-214ENST00000637594 ATP8B3O60423 1300 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 A0A1W2PQF6 199 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 CLIC2O15247 247 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 AP5Z1O43299 807 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 STX6O43752 255 aa9.33□□□□□ -0.92
CLN8-214ENST00000637594 CUTAO60888 179 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms