RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GATAD2BQ8WXI9 593 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 LRTOMTQ8WZ04 291 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 RAPGEF5Q92565 580 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CDKL2Q92772 493 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ATP6V0A1Q93050 837 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 PHKBQ93100 1093 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 LRRC59Q96AG4 307 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 ZC3H10Q96K80 434 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 ARL5BQ96KC2 179 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 FAM167AQ96KS9 214 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 FCRL2Q96LA5 508 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 HS6ST2Q96MM7 605 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 TTC25Q96NG3 672 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CATSPER2Q96P56 530 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 NOX5Q96PH1 765 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 MTMR9Q96QG7 549 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ORAI3Q9BRQ5 295 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SPXQ9BT56 116 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 TBCDQ9BTW9 1192 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 PHF20Q9BVI0 1012 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 KRT23Q9C075 422 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SENP6Q9GZR1 1112 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 SMARCAD1Q9H4L7 1026 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SYNCQ9H7C4 482 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 C8orf33Q9H7E9 229 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 DNAJC18Q9H819 358 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 MMRN2Q9H8L6 949 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ERVMER34-1Q9H9K5 563 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 FANCEQ9HB96 536 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 EMC7Q9NPA0 242 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ERVK13-1Q9NX77 482 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 HMG20BQ9P0W2 317 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 USP36Q9P275 1121 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 SUCLA2Q9P2R7 463 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 FBXO40Q9UH90 709 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SRP68Q9UHB9 627 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 PRELID1Q9Y255 219 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SPO11Q9Y5K1 396 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 WDR19Q8NEZ3 1342 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 TRAV6A0A075B6T7 132 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 A0A0U1RQK1 487 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 ZNF320A2RRD8 509 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CAPN14A8MX76 684 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CHURC1-FNTBB4DL54 471 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 GPR89AB7ZAQ6 455 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 H0YAE9 185 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 VWA5AO00534 786 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 DDX3XO00571 662 aaKnown RBP eCLIP3.2□□□□□ -1.9
VIM-210ENST00000637053 PSMA7O14818 248 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 PROM1O43490 865 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 TSPAN1O60635 241 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 DNAJA2O60884 412 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 PEX11AO75192 247 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 H2AFYO75367 372 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 BEST1O76090 585 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 FGF18O76093 207 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 TMEM63AO94886 807 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 UBXN7O94888 489 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 LRG1P02750 347 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 AFPP02771 609 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 AMHP03971 560 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 THP07101 528 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 LTA4HP09960 611 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 GPR89BP0CG08 455 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 TROVE2P10155 538 aaKnown RBP eCLIP3.2□□□□□ -1.9
VIM-210ENST00000637053 ACTN1P12814 892 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 PDCP20941 246 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 IL10P22301 178 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 KCNA5P22460 613 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CTSSP25774 331 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 ACSL1P33121 698 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 THPOP40225 353 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 RGS2P41220 211 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 DPP6P42658 865 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 ACAA2P42765 397 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 KCNJ4P48050 445 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 LSSP48449 732 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 ALDH9A1P49189 494 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 PLTPP55058 493 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 HDAC4P56524 1084 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 GSCP56915 257 aaPredicted RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 DSG1Q02413 1049 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 RPL6Q02878 288 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 CREB5Q02930 508 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 MVKQ03426 396 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 YWHAHQ04917 246 aaPredicted RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 FOXO1Q12778 655 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CETN1Q12798 172 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 MAP4K2Q12851 820 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CHAF1BQ13112 559 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CAMK2DQ13557 499 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 PTK2BQ14289 1009 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 NFE2L1Q14494 772 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 ACAP2Q15057 778 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CNN3Q15417 329 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 TARBP2Q15633 366 aaKnown RBP3.2□□□□□ -1.9
VIM-210ENST00000637053 PFKFB4Q16877 469 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 MPEG1Q2M385 716 aa3.2□□□□□ -1.9
VIM-210ENST00000637053 CTXN3Q4LDR2 81 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms