RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 SSU72P8A0A1W2PR75 194 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 TMCO5BA8MYB1 307 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.213e-21■■■■□ 22.5
CTSD-207ENST00000636571 FAM228BP0C875 321 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 CSH1P0DML2 217 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 CSH2P0DML3 217 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 PTPN2P17706 415 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 SP100P23497 879 aaPredicted RBP16.34■□□□□ 0.21
CTSD-207ENST00000636571 CYLC1P35663 651 aaPredicted RBP16.34■□□□□ 0.21
CTSD-207ENST00000636571 TKTL1P51854 596 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 NOMO3P69849 1222 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 TAF12Q16514 161 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
CTSD-207ENST00000636571 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 PABPC1LQ4VXU2 614 aaKnown RBP16.34■□□□□ 0.21
CTSD-207ENST00000636571 STXBP5Q5T5C0 1151 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 RTL10Q7L3V2 364 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 ZNF677Q86XU0 584 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 ELMOD1Q8N336 334 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 ITFG1Q8TB96 612 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 LHX5Q9H2C1 402 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 POMKQ9H5K3 350 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 TRMT1Q9NXH9 659 aaKnown RBP16.34■□□□□ 0.21
CTSD-207ENST00000636571 TFR2Q9UP52 801 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 DOCK8Q8NF50 2099 aa16.34■□□□□ 0.21
CTSD-207ENST00000636571 A0A0U1RQJ8 604 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 A0A1W2PRU2 124 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 E5RJQ4 531 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 ZNF263O14978 683 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 MBTPS2O43462 519 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 MOSPD3O75425 235 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 CYP1A1P04798 512 aaPredicted RBP16.33■□□□□ 0.21
CTSD-207ENST00000636571 USP17L7P0C7H9 530 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 SLC8A3P57103 927 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 CYP4F8P98187 520 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 ITIH3Q06033 890 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 TAF10Q12962 218 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 RAB41Q5JT25 222 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 CES5AQ6NT32 575 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 CCDC170Q8IYT3 715 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 ST13P5Q8NFI4 369 aaPredicted RBP16.33■□□□□ 0.21
CTSD-207ENST00000636571 ATRIPQ8WXE1 791 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 PIWIL1Q96J94 861 aaKnown RBP16.33■□□□□ 0.21
CTSD-207ENST00000636571 ULBP1Q9BZM6 244 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 MIS12Q9H081 205 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 ASAH2Q9NR71 780 aa16.33■□□□□ 0.21
CTSD-207ENST00000636571 CHORDC1Q9UHD1 332 aaPredicted RBP16.33■□□□□ 0.21
CTSD-207ENST00000636571 ERBB2P04626 1255 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 UNGP13051 313 aaPredicted RBP16.33■□□□□ 0.2
CTSD-207ENST00000636571 GABRR2P28476 465 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
CTSD-207ENST00000636571 PRSS36Q5K4E3 855 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 CYP4A22Q5TCH4 519 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 SMYD5Q6GMV2 418 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
CTSD-207ENST00000636571 PHLDB2Q86SQ0 1253 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 ITIH5Q86UX2 942 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 SUSD6Q92537 303 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 FBXO32Q969P5 355 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 TTLL2Q9BWV7 592 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 SLC4A5Q9BY07 1137 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 PNPLA8Q9NP80 782 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 IL37Q9NZH6 218 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 GMIPQ9P107 970 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.2
CTSD-207ENST00000636571 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
CTSD-207ENST00000636571 F11P03951 625 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 POU2F2P09086 479 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 CEBPBP17676 345 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 YWHAQP27348 245 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 KCNQ1P51787 676 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 EPHA5P54756 1037 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 CLEC16AQ2KHT3 1053 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 ATAT1Q5SQI0 421 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 GET4Q7L5D6 327 aaPredicted RBP16.32■□□□□ 0.2
CTSD-207ENST00000636571 BHLHA9Q7RTU4 235 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 VPS36Q86VN1 386 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 SHKBP1Q8TBC3 707 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 KCTD13Q8WZ19 329 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 PPP1R13BQ96KQ4 1090 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 MYRFLQ96LU7 910 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 NMUR1Q9HB89 426 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 LRRC4Q9HBW1 653 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 WDR6Q9NNW5 1121 aaKnown RBP16.32■□□□□ 0.2
CTSD-207ENST00000636571 OSER1Q9NX31 292 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 ADGRG1Q9Y653 693 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 USP3Q9Y6I4 520 aa16.32■□□□□ 0.2
CTSD-207ENST00000636571 USP27XA6NNY8 438 aa16.31■□□□□ 0.2
CTSD-207ENST00000636571 EIF3CLB5ME19 914 aaKnown RBP16.31■□□□□ 0.2
CTSD-207ENST00000636571 RPL34P49207 117 aaKnown RBP16.31■□□□□ 0.2
CTSD-207ENST00000636571 CBX2Q14781 532 aaPredicted RBP16.31■□□□□ 0.2
CTSD-207ENST00000636571 SPA17Q15506 151 aa16.31■□□□□ 0.2
CTSD-207ENST00000636571 TEAD2Q15562 447 aa16.31■□□□□ 0.2
CTSD-207ENST00000636571 SLC18A3Q16572 532 aa16.31■□□□□ 0.2
CTSD-207ENST00000636571 CCDC122Q5T0U0 273 aa16.31■□□□□ 0.2
CTSD-207ENST00000636571 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms