RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 NAPEPLDQ6IQ20 393 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 NLRP9Q7RTR0 991 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 TMC3Q7Z5M5 1100 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 KIAA0319LQ8IZA0 1049 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 GALNT4Q8N4A0 578 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 OR5B17Q8NGF7 314 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 PDGFDQ9GZP0 370 aaPredicted RBP14.72□□□□□ -0.05
GABRB3-219ENST00000636466 ANGPT2O15123 496 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 CYP3A4P08684 503 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 ETS1P14921 441 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 NFKBIAP25963 317 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 DLK2Q6UY11 383 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 TFAP2DQ7Z6R9 452 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 SLC2A14Q8TDB8 520 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 PWWP2AQ96N64 755 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 GPR63Q9BZJ6 419 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 FHDC1Q9C0D6 1143 aaPredicted RBP14.72□□□□□ -0.05
GABRB3-219ENST00000636466 CD248Q9HCU0 757 aa14.72□□□□□ -0.05
GABRB3-219ENST00000636466 DDX43Q9NXZ2 648 aaKnown RBP14.72□□□□□ -0.05
GABRB3-219ENST00000636466 E5RJQ4 531 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 TGFB1I1O43294 461 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 SPAG6O75602 509 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 GLRA2P23416 452 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 TNFSF9P41273 254 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 AARSP49588 968 aaKnown RBP eCLIP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 ZNF844Q08AG5 666 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 ITGB3BPQ13352 177 aaPredicted RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 DDX53Q86TM3 631 aaKnown RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 BRSK2Q8IWQ3 736 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 LNX1Q8TBB1 728 aaPredicted RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 PBXIP1Q96AQ6 731 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 TRIM54Q9BYV2 358 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 DCLK3Q9C098 648 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 WHRNQ9P202 907 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 SUPT7LO94864 414 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 CORO7P57737 925 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 C1QBPQ07021 282 aaKnown RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 ANO5Q75V66 913 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 TMEM161BQ8NDZ6 487 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 CTNNAL1Q9UBT7 734 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 SLC13A4Q9UKG4 626 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 REXO2Q9Y3B8 237 aaKnown RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 SUPT3HB4E1H0 165 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 SUPT3HO75486 399 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 CYP2F1P24903 491 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 MIPP30301 263 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 RGS2P41220 211 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 ABCG1P45844 678 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 AP1ARQ63HQ0 302 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 SH3BP5LQ7L8J4 393 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 NETO2Q8NC67 525 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 ZNF518BQ9C0D4 1074 aa14.71□□□□□ -0.05
GABRB3-219ENST00000636466 GPBP1L1Q9HC44 474 aaPredicted RBP14.71□□□□□ -0.05
GABRB3-219ENST00000636466 MRC1P22897 1456 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 DNAJB2P25686 324 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 SLC26A2P50443 739 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 RPL10AP62906 217 aaKnown RBP14.71□□□□□ -0.06
GABRB3-219ENST00000636466 FKBP1CQ5VVH2 108 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 PTRHD1Q6GMV3 140 aaKnown RBP14.71□□□□□ -0.06
GABRB3-219ENST00000636466 TTC23LQ6PF05 361 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 BCAS3Q9H6U6 928 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 GPRC5DQ9NZD1 345 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 BARX2Q9UMQ3 279 aaPredicted RBP14.71□□□□□ -0.06
GABRB3-219ENST00000636466 PKP3Q9Y446 797 aa14.71□□□□□ -0.06
GABRB3-219ENST00000636466 UBOX5O94941 541 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 ODC1P11926 461 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 ALDH7A1P49419 539 aaKnown RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 NME5P56597 212 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 RNF180Q86T96 592 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 GPC2Q8N158 579 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 FBXO32Q969P5 355 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 RUBCNLQ9H714 662 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 IARS2Q9NSE4 1012 aaKnown RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 NCF1BA6NI72 391 aaPredicted RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 NCF1CA8MVU1 366 aaPredicted RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 SCAMP3O14828 347 aaKnown RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 RIPK2O43353 540 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 NCF1P14598 390 aaPredicted RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 BGNP21810 368 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 HARS2P49590 506 aaKnown RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 POU6F1Q14863 301 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 HS6ST3Q8IZP7 471 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 SH3TC2Q8TF17 1288 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 CD274Q9NZQ7 290 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 PCDHGC5Q9Y5F6 944 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 PCDHA3Q9Y5H8 950 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 CNTRLQ7Z7A1 2325 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 SDR42E2A6NKP2 422 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 PJA2O43164 708 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 SERPIND1P05546 499 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 MCL1Q07820 350 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 TATDN1Q6P1N9 297 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 SPATA20Q8TB22 786 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 GANQ9H2C0 597 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 UTP6Q9NYH9 597 aaKnown RBP14.7□□□□□ -0.06
GABRB3-219ENST00000636466 KIAA1257Q9ULG3 409 aa14.7□□□□□ -0.06
GABRB3-219ENST00000636466 MICAL2O94851 1124 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms