RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 ITGA8P53708 1063 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ADCY2Q08462 1091 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 SOWAHAQ2M3V2 549 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 PAN2Q504Q3 1202 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 UBAP2Q5T6F2 1119 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 SRLQ86TD4 932 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 NPAS4Q8IUM7 802 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ABI1Q8IZP0 508 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 CCDC89Q8N998 374 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 TMEM176AQ96HP8 235 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 TWNKQ96RR1 684 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 MRPL45Q9BRJ2 306 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 IL23AQ9NPF7 189 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 AAASQ9NRG9 546 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 GDAP2Q9NXN4 497 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 DNAJB4Q9UDY4 337 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 CYTH4Q9UIA0 394 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 GOLGA8SH3BPF8 625 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 NDUFAB1O14561 156 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 KRT3P12035 628 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 KRT10P13645 584 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 RPL9P32969 192 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 PTPN7P35236 360 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 PNPLA4P41247 253 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 GSCP56915 257 aaPredicted RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 LMNB2Q03252 620 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ORC1Q13415 861 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 KAZNQ674X7 775 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 SPOCD1Q6ZMY3 1216 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 BBOF1Q8ND07 529 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 URGCPQ8TCY9 931 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 CDC42EP4Q9H3Q1 356 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 WDR35Q9P2L0 1181 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 ANAPC5Q9UJX4 755 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 NME7Q9Y5B8 376 aa16.42■□□□□ 0.22
CHRNA7-212ENST00000636271 TLDC2A0PJX2 215 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 B3GAT3O94766 335 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 RFC1P35251 1148 aaPredicted RBP16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 WDR5P61964 334 aaKnown RBP16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 RNASELQ05823 741 aaKnown RBP16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 SV2CQ496J9 727 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 TFDP3Q5H9I0 405 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 C6orf118Q5T5N4 469 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 TXNRD3NBQ6F5E7 133 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 FNIP1Q8TF40 1166 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 HASPINQ8TF76 798 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 TOP1MTQ969P6 601 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 CPXM1Q96SM3 734 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 KANSL3Q9P2N6 904 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 TJP2Q9UDY2 1190 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 ZMYND8Q9ULU4 1186 aaPredicted RBP16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 RRP15Q9Y3B9 282 aaKnown RBP16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 MICAL3Q7RTP6 2002 aa16.41■□□□□ 0.22
CHRNA7-212ENST00000636271 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 TBKBP1A7MCY6 615 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 I3L4J1 428 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 EBAG9O00559 213 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 RGS16O15492 202 aaPredicted RBP16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 HCRTO43612 131 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 LIASO43766 372 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 PFKMP08237 780 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 PSMA2P25787 234 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 CHKAP35790 457 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 VPS41P49754 854 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 PSMC1P62191 440 aaKnown RBP16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 GSTA5Q7RTV2 222 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 LIMS2Q7Z4I7 341 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 UHMK1Q8TAS1 419 aaKnown RBP16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 KBTBD7Q8WVZ9 684 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 SYNCQ9H7C4 482 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 CNOT10Q9H9A5 744 aaKnown RBP16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 hCG_1818297A0A087WSY0 165 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 DGKIO75912 1065 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 MICAL2O94851 1124 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 ERBB2P04626 1255 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 KLRC2P26717 231 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 CDR1P51861 262 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 FPGSQ05932 587 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 FAM117BQ6P1L5 589 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 JOSD2Q8TAC2 188 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 RAPGEF5Q92565 580 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 NRDE2Q9H7Z3 1164 aa16.4■□□□□ 0.22
CHRNA7-212ENST00000636271 M0QYV0 167 aa16.39■□□□□ 0.21
CHRNA7-212ENST00000636271 CYB561D2O14569 222 aa16.39■□□□□ 0.21
CHRNA7-212ENST00000636271 RASGRF2O14827 1237 aa16.39■□□□□ 0.21
CHRNA7-212ENST00000636271 HOXA2O43364 376 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms