RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ADORA2BP29275 332 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 NUCB2P80303 420 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 ENPEPQ07075 957 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 ORC1Q13415 861 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 SLC2A14Q8TDB8 520 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 TSG101Q99816 390 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 RNF38Q9H0F5 515 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 CYP3A43Q9HB55 503 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 TMEM30AQ9NV96 361 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 C2orf42Q9NWW7 574 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 TBC1D14Q9P2M4 693 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
PNKP-225ENST00000636214 CDV3Q9UKY7 258 aaKnown RBP18.99■□□□□ 0.63
PNKP-225ENST00000636214 SH3BP1Q9Y3L3 701 aa18.99■□□□□ 0.63
PNKP-225ENST00000636214 CETN3O15182 167 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 HRO43593 1189 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 LRP3O75074 770 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 SMC2O95347 1197 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 OLFM2O95897 454 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 ASPAP45381 313 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 SRSF5Q13243 272 aaKnown RBP18.98■□□□□ 0.63
PNKP-225ENST00000636214 RSPO4Q2I0M5 234 aaPredicted RBP18.98■□□□□ 0.63
PNKP-225ENST00000636214 EDRF1Q3B7T1 1238 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 PKN3Q6P5Z2 889 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 FUKQ8N0W3 1084 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 CRYBG2Q8N1P7 616 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 CAMKK1Q8N5S9 505 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 SCAMP5Q8TAC9 235 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 NT5C1AQ9BXI3 368 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 NIF3L1Q9GZT8 377 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 TMEM8AQ9HCN3 771 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 GMIPQ9P107 970 aa18.98■□□□□ 0.63
PNKP-225ENST00000636214 CHORDC1Q9UHD1 332 aaPredicted RBP18.98■□□□□ 0.63
PNKP-225ENST00000636214 CACNA1AO00555 2505 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 CCDC163A0A0D9SF12 145 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 RPP40O75818 363 aaKnown RBP18.97■□□□□ 0.63
PNKP-225ENST00000636214 CD58P19256 250 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 GTF2H1P32780 548 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 PXNP49023 591 aaPredicted RBP18.97■□□□□ 0.63
PNKP-225ENST00000636214 TUBP50607 506 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 MAP3K7CLP57077 242 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 SPEM2Q0P670 501 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 NAIF1Q69YI7 327 aaPredicted RBP18.97■□□□□ 0.63
PNKP-225ENST00000636214 KRT39Q6A163 491 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 GTPBP4Q9BZE4 634 aaKnown RBP18.97■□□□□ 0.63
PNKP-225ENST00000636214 FBRSL1Q9HCM7 1045 aaKnown RBP18.97■□□□□ 0.63
PNKP-225ENST00000636214 TLR8Q9NR97 1041 aaKnown RBP18.97■□□□□ 0.63
PNKP-225ENST00000636214 HMGXB4Q9UGU5 601 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 MYO16Q9Y6X6 1858 aa18.97■□□□□ 0.63
PNKP-225ENST00000636214 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 COCHO43405 550 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 CYP17A1P05093 508 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 MXI1P50539 228 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 SEC13P55735 322 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 GOLGA8FQ08AF8 430 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 GOLGA8DPQ0D2H9 430 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 INCA1Q0VD86 236 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 PNOCQ13519 176 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 DHCR24Q15392 516 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 C1orf220Q5T0J3 134 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 PAQR9Q6ZVX9 377 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 CACNA2D4Q7Z3S7 1137 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 SMYD4Q8IYR2 804 aaPredicted RBP18.96■□□□□ 0.63
PNKP-225ENST00000636214 TTC39CQ8N584 583 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 TAS1R2Q8TE23 839 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 GAB3Q8WWW8 586 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 JAKMIP2Q96AA8 810 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 OTUB2Q96DC9 234 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 HHIPQ96QV1 700 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 DCHS1Q96JQ0 3298 aa18.96■□□□□ 0.63
PNKP-225ENST00000636214 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.95■□□□□ 0.62
PNKP-225ENST00000636214 TNFRSF10BO14763 440 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 SCAMP3O14828 347 aaKnown RBP18.95■□□□□ 0.62
PNKP-225ENST00000636214 AXIN1O15169 862 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 FOXD2O60548 495 aaPredicted RBP18.95■□□□□ 0.62
PNKP-225ENST00000636214 APBB3O95704 486 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 APODP05090 189 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 ADH5P11766 374 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 ZXDBP98169 803 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 PPP3CAQ08209 521 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 DMC1Q14565 340 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 PREPLQ4J6C6 727 aaPredicted RBP18.95■□□□□ 0.62
PNKP-225ENST00000636214 TCERG1LQ5VWI1 586 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 BTBD8Q5XKL5 378 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 SYT13Q7L8C5 426 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 C12orf29Q8N999 325 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 GSDMAQ96QA5 445 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 HNRNPABQ99729 332 aaKnown RBP18.95■□□□□ 0.62
PNKP-225ENST00000636214 SMOQ99835 787 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 CCSER2Q9H7U1 834 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 MYOFQ9NZM1 2061 aa18.95■□□□□ 0.62
PNKP-225ENST00000636214 IRF1P10914 325 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 STIM1Q13586 685 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 ZCWPW2Q504Y3 356 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 DCAF17Q5H9S7 520 aaPredicted RBP18.94■□□□□ 0.62
PNKP-225ENST00000636214 SNX30Q5VWJ9 437 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 NUDT18Q6ZVK8 323 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 ADGRG2Q8IZP9 1017 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 FAM160A2Q8N612 972 aaPredicted RBP18.94■□□□□ 0.62
PNKP-225ENST00000636214 FBXL13Q8NEE6 735 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms