RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 RIPK2O43353 540 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 NR2C2P49116 596 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD2-221ENST00000635856 CD83Q01151 205 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 CENPCQ03188 943 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 FLOT2Q14254 428 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 NAB2Q15742 525 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 AARS2Q5JTZ9 985 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 POTEAQ6S8J7 498 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 LRRC71Q8N4P6 559 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SCFD2Q8WU76 684 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 JPH3Q8WXH2 748 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 C12orf43Q96C57 262 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 CCDC124Q96CT7 223 aaKnown RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 CEP95Q96GE4 821 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 DCUN1D1Q96GG9 259 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 DACH2Q96NX9 599 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 WRNIP1Q96S55 665 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MNTQ99583 582 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 SENP6Q9GZR1 1112 aaPredicted RBP6.33□□□□□ -1.4
CHD2-221ENST00000635856 SYTL2Q9HCH5 934 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 ACTR3BQ9P1U1 418 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 MBD2Q9UBB5 411 aa6.33□□□□□ -1.4
CHD2-221ENST00000635856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD2-221ENST00000635856 EMSYQ7Z589 1322 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 LAMC1P11047 1609 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 ZFYVE9O95405 1425 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 A0A0D9SFI3 127 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 TRIM75PA6NK02 468 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 ZNF701M0R085 212 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 ATP2A1O14983 1001 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 HOXA2O43364 376 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 C6orf222P0C671 652 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 HOXB1P14653 301 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 IL10P22301 178 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 RBL1P28749 1068 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SLC26A3P40879 764 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 IL12RB1P42701 662 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SLC1A4P43007 532 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 RECQLP46063 649 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 POLR2GP62487 172 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD2-221ENST00000635856 PRAMEP78395 509 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 TNFAIP2Q03169 654 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 BFSP1Q12934 665 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 AP3B2Q13367 1082 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 ZBED5Q49AG3 693 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 HDDC2Q7Z4H3 204 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 NCOA7Q8NI08 942 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 ENKURQ8TC29 256 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 JDP2Q8WYK2 163 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 GCOM2Q9BZD3 368 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 ADAM7Q9H2U9 754 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 KMT5AQ9NQR1 393 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 HOMER2Q9NSB8 354 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 CCDC59Q9P031 241 aaKnown RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 ASIC3Q9UHC3 531 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 STRIP2Q9ULQ0 834 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 PPM1HQ9ULR3 514 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SPATA2Q9UM82 520 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 EDARQ9UNE0 448 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 RTCBQ9Y3I0 505 aaKnown RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 A0A1W2PP64 1363 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 KDM5AP29375 1690 aaKnown RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 SSU72P8A0A1W2PR75 194 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 GOLGA8SH3BPF8 625 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 DYRK3O43781 588 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 GTPBP6O43824 516 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 EDF1O60869 148 aaKnown RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 TAF5LO75529 589 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SULT1C4O75897 302 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SNAP29O95721 258 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SLC5A1P13866 664 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 PTPREP23469 700 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 CXCR2P25025 360 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 PRKCIP41743 596 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 DEFA1P59665 94 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 DEFA3P59666 94 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 COASYQ13057 564 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SLC39A6Q13433 755 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 Q3C1V9 767 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SEL1L2Q5TEA6 688 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 ZNF704Q6ZNC4 412 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 TMEM151BQ8IW70 566 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SLAIN1Q8ND83 568 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 TEX47Q8TBZ9 253 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 AKAP1Q92667 903 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD2-221ENST00000635856 NCLNQ969V3 563 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 LRRC39Q96DD0 335 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 MTMR8Q96EF0 704 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 FAM20AQ96MK3 541 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 RBM15Q96T37 977 aaKnown RBP eCLIP6.32□□□□□ -1.49e-7■□□□□ 11.3
CHD2-221ENST00000635856 ZKSCAN3Q9BRR0 538 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 TMEM246Q9BRR3 403 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 BEGAINQ9BUH8 593 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 SLA2Q9H6Q3 261 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 CYP4F12Q9HCS2 524 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 ATP13A2Q9NQ11 1180 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 C20orf96Q9NUD7 363 aaPredicted RBP6.32□□□□□ -1.4
CHD2-221ENST00000635856 TAGLN3Q9UI15 199 aa6.32□□□□□ -1.4
CHD2-221ENST00000635856 RIMKLBQ9ULI2 386 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms