RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 HEPACAM2A8MVW5 462 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 EPHB6O15197 1021 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 TEX33O43247 280 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 GABBR2O75899 941 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 OLFM2O95897 454 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 SRFP11831 508 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 HDCP19113 662 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 AVPR1AP37288 418 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 PLA2G4AP47712 749 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 ZNF445P59923 1031 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 GPC5P78333 572 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 PTK2Q05397 1052 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 RAPGEF1Q13905 1077 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 ZNF268Q14587 947 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 MEA1Q16626 185 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 VITQ6UXI7 678 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 TRIM67Q6ZTA4 783 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 MFSD6LQ8IWD5 586 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 CELF5Q8N6W0 485 aaKnown RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 ARL14EPQ8N8R7 260 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 RNF214Q8ND24 703 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 KCTD13Q8WZ19 329 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 RNF38Q9H0F5 515 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 SMG9Q9H0W8 520 aaKnown RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 TRPC7Q9HCX4 862 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 SLC2A4RGQ9NR83 387 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 FAM207AQ9NSI2 230 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-210ENST00000635675 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 GMIPQ9P107 970 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 CCL26Q9Y258 94 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 DAAM1Q9Y4D1 1078 aa10.26□□□□□ -0.77
LINC00339-210ENST00000635675 TRAV19A0A0A6YYK7 116 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 GOLGA6L3A6NEY3 463 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 F8VZ95 297 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 MED7O43513 233 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 ABL1P00519 1130 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 CFHP08603 1231 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 USP17L7P0C7H9 530 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 PSMC3P17980 439 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 GNA15P30679 374 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 GPD2P43304 727 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
LINC00339-210ENST00000635675 TUBP50607 506 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 PDE6CP51160 858 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 JAM2P57087 298 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 BPIFB4P59827 614 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 POLR2FP61218 127 aaKnown RBP10.25□□□□□ -0.77
LINC00339-210ENST00000635675 TPM4P67936 248 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 SLC7A9P82251 487 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 SIGLEC14Q08ET2 396 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 NR1I3Q14994 352 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 PM20D1Q6GTS8 502 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 PMF1Q6P1K2 205 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 DENND1BQ6P3S1 775 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 SCD5Q86SK9 330 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 SLC47A2Q86VL8 602 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 DEPDC1BQ8WUY9 529 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
LINC00339-210ENST00000635675 ASIC4Q96FT7 647 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 TRMT61BQ9BVS5 477 aaKnown RBP10.25□□□□□ -0.77
LINC00339-210ENST00000635675 NMUR1Q9HB89 426 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 C11orf16Q9NQ32 467 aa10.25□□□□□ -0.77
LINC00339-210ENST00000635675 TLR8Q9NR97 1041 aaKnown RBP10.25□□□□□ -0.77
LINC00339-210ENST00000635675 GOLGA6L19H0YKK7 550 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 M0QYV0 167 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 DPYSL4O14531 572 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 COCHO43405 550 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 THAP12O43422 761 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 GPR37L1O60883 481 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 ZBED1O96006 694 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 SERPINC1P01008 464 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CKMP06732 381 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 PSEN1P49768 467 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 TKTL1P51854 596 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 ZXDBP98169 803 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 FANCCQ00597 558 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 GRM2Q14416 872 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 FILIP1LQ4L180 1135 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 HECTD3Q5T447 861 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 ZNF276Q8N554 614 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 WDTC1Q8N5D0 677 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 NEK11Q8NG66 645 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 RIN3Q8TB24 985 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 BPIFB1Q8TDL5 484 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 STK32AQ8WU08 396 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 HSFY1Q96LI6 401 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 PCMTD1Q96MG8 357 aaPredicted RBP10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CCSER2Q9H7U1 834 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 KIF9Q9HAQ2 790 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 NLRC4Q9NPP4 1024 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 CYLDQ9NQC7 956 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 OSER1Q9NX31 292 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 WNT16Q9UBV4 365 aa10.24□□□□□ -0.77
LINC00339-210ENST00000635675 PCDHGC3Q9UN70 934 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms