RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 SNX9Q9Y5X1 595 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 A0A1W2PRQ8 180 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 F8VP50 259 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 SNX2O60749 519 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 CTSHP09668 335 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 ATF2P15336 505 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 ATF4P18848 351 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-230ENST00000634433 NOS2P35228 1153 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 RDXP35241 583 aaKnown RBP7.5□□□□□ -1.21
BRCA1-230ENST00000634433 RFC1P35251 1148 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-230ENST00000634433 ETFBP38117 255 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 BEX3Q00994 111 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 CRHR2Q13324 411 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 PDCLQ13371 301 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 SNX1Q13596 522 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 XKR4Q5GH76 650 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 TFDP3Q5H9I0 405 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 AGBL2Q5U5Z8 902 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 DENND2CQ68D51 928 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
BRCA1-230ENST00000634433 HOOK3Q86VS8 718 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 ZDHHC17Q8IUH5 632 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 PLPP6Q8IY26 295 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 TEX19Q8NA77 164 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 FBXO25Q8TCJ0 367 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 ATP6V1G3Q96LB4 118 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 TWNKQ96RR1 684 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 CPXM1Q96SM3 734 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 HEMGNQ9BXL5 484 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 TXLNGYQ9BZA5 131 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 FOXP3Q9BZS1 431 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 PABPC3Q9H361 631 aaKnown RBP7.5□□□□□ -1.21
BRCA1-230ENST00000634433 TMBIM4Q9HC24 238 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 GRHL1Q9NZI5 618 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 CITO14578 2027 aa7.5□□□□□ -1.21
BRCA1-230ENST00000634433 H0YGN5 161 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GJB6O95452 261 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 C6orf222P0C671 652 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 RARGP13631 454 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 PCK1P35558 622 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 CDR1P51861 262 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SKOR1P84550 965 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 UAP1Q16222 522 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SV2CQ496J9 727 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GNASQ5JWF2 1037 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 FBXO47Q5MNV8 452 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 EMC10Q5UCC4 262 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ARHGAP17Q68EM7 881 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 LVRNQ6Q4G3 990 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ZDHHC24Q6UX98 284 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 TRMT10CQ7L0Y3 403 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GSTA5Q7RTV2 222 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ARL8AQ96BM9 186 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ZMAT2Q96NC0 199 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 CNPY3Q9BT09 278 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 UPF3AQ9H1J1 476 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SNX25Q9H3E2 840 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 NGRNQ9NPE2 291 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 CYLDQ9NQC7 956 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 CHST7Q9NS84 486 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GDAP2Q9NXN4 497 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 HMGXB4Q9UGU5 601 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 CYTH4Q9UIA0 394 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 TSPAN16Q9UKR8 245 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 TRPV2Q9Y5S1 764 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 NFS1Q9Y697 457 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 DOCK3Q8IZD9 2030 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SMIM28A0A1B0GU29 152 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 PIRO00625 290 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 KRT14P02533 472 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ERBB2P04626 1255 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 NUDT17P0C025 328 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 RARBP10826 455 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GPD1P21695 349 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ACTN2P35609 894 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ADCY8P40145 1251 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 TAF6P49848 677 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 NKX3-2P78367 333 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 MRPS6P82932 125 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 OGDHQ02218 1023 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF252P-AS1Q0IIN9 211 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ORC1Q13415 861 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SQSTM1Q13501 440 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ARHGEF6Q15052 776 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GOLGA7BQ2TAP0 167 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 TTMPQ5BVD1 217 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 FAM102AQ5T9C2 384 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 TWF2Q6IBS0 349 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 OR6B2Q6IFH4 312 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 MFSD7Q6UXD7 560 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SESTD1Q86VW0 696 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 RGL4Q8IZJ4 473 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 OR6B3Q8NGW1 331 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 UBA3Q8TBC4 463 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 LENG1Q96BZ8 264 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 APOL6Q9BWW8 343 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms