RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	CFAP45	Q9UL16	551 aa		11.03	□□□□□ -0.64
UBE3A-223	ENST00000631247	CPQ	Q9Y646	472 aa		11.03	□□□□□ -0.64
UBE3A-223	ENST00000631247	CEP295	Q9C0D2	2601 aa		11.03	□□□□□ -0.64
UBE3A-223	ENST00000631247	PVALEF	A0A1B0GWK0	134 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZNF840P	A6NDX5	716 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	SLC9A3R1	O14745	358 aa	Predicted RBP	11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	GDF9	O60383	454 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	STAU1	O95793	577 aa	Known RBP	11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	P4HA1	P13674	534 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TCF3	P15923	654 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TRIM21	P19474	475 aa	Known RBP	11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	GBP1	P32455	592 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	DGKE	P52429	567 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	SEC13	P55735	322 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	MYL6	P60660	151 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TAF10	Q12962	218 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	CUL4B	Q13620	913 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	CCDC6	Q16204	474 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	KNOP1	Q1ED39	458 aa	Known RBP	11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	BMT2	Q1RMZ1	405 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	PPM1J	Q5JR12	505 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	FILIP1	Q7Z7B0	1213 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	KBTBD6	Q86V97	674 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TTC30A	Q86WT1	665 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	PDZD8	Q8NEN9	1154 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TSTD1	Q8NFU3	115 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TATDN2	Q93075	761 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	SNX21	Q969T3	373 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	C8orf48	Q96LL4	319 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	TTLL2	Q9BWV7	592 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	FAM117A	Q9C073	453 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZNF518B	Q9C0D4	1074 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	NACA2	Q9H009	215 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	DPEP3	Q9H4B8	488 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	PCDHGA5	Q9Y5G8	931 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	EML5	Q05BV3	1969 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	ACACB	O00763	2458 aa		11.02	□□□□□ -0.65
UBE3A-223	ENST00000631247	CLDN5	O00501	218 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	SCAMP3	O14828	347 aa	Known RBP	11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	RHOBTB1	O94844	696 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	RTN3	O95197	1032 aa	Predicted RBP	11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	ADH1C	P00326	375 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	FAM163B	P0C2L3	166 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	MBL2	P11226	248 aa	Predicted RBP	11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	YWHAQ	P27348	245 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	MPL	P40238	635 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	CASP4	P49662	377 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	AP3M2	P53677	418 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	SLC7A9	P82251	487 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	NCOA4	Q13772	614 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	SF3A2	Q15428	464 aa	Known RBP	11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	C2orf27A	Q580R0	203 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZNF667	Q5HYK9	610 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	RESP18	Q5W5W9	173 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	ATL3	Q6DD88	541 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	C11orf74	Q86VG3	221 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	C12orf56	Q8IXR9	622 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	GRAMD1C	Q8IYS0	662 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	NUP93	Q8N1F7	819 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	FBXO32	Q969P5	355 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	TNIP3	Q96KP6	325 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	LINC00597	Q9H2U6	94 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	SMYD3	Q9H7B4	428 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	VPS45	Q9NRW7	570 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	CFAP97	Q9P2B7	532 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	PCDHA7	Q9UN72	937 aa		11.01	□□□□□ -0.65
UBE3A-223	ENST00000631247	ALDH1A2	O94788	518 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	CYP17A1	P05093	508 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	SLFN14	P0C7P3	912 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZNF806	P0C7X5	589 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	ADH5	P11766	374 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	RAP1GAP	P47736	663 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	CACNA2D1	P54289	1103 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	CREB5	Q02930	508 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	EHHADH	Q08426	723 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	PLK5	Q496M5	336 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	ANO7	Q6IWH7	933 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	FAM35A	Q86V20	835 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	CCDC47	Q96A33	483 aa	Known RBP	11	□□□□□ -0.65
UBE3A-223	ENST00000631247	SMARCD1	Q96GM5	515 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	B3GNT5	Q9BYG0	378 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	TPSD1	Q9BZJ3	242 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	XYLT2	Q9H1B5	865 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	SERTAD1	Q9UHV2	236 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	SH3BP1	Q9Y3L3	701 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	NME7	Q9Y5B8	376 aa		11	□□□□□ -0.65
UBE3A-223	ENST00000631247	MYH10	P35580	1976 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	FRY	Q5TBA9	3013 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	SDK1	Q7Z5N4	2213 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	AP1G2	O75843	785 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	OLFM2	O95897	454 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	OAS1	P00973	400 aa	Known RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	APOD	P05090	189 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	ADRB1	P08588	477 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	OPRD1	P41143	372 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms