RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 CTGFP29279 349 aa4□□□□□ -1.77
SRP54-214ENST00000630962 UQCRC1P31930 480 aa4□□□□□ -1.77
SRP54-214ENST00000630962 PTDSS1P48651 473 aaKnown RBP4□□□□□ -1.77
SRP54-214ENST00000630962 GATMP50440 423 aa4□□□□□ -1.77
SRP54-214ENST00000630962 E2F1Q01094 437 aa4□□□□□ -1.77
SRP54-214ENST00000630962 SP2Q02086 613 aa4□□□□□ -1.77
SRP54-214ENST00000630962 SEMA5AQ13591 1074 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CLCA4Q14CN2 919 aa4□□□□□ -1.77
SRP54-214ENST00000630962 ZNF750Q32MQ0 723 aa4□□□□□ -1.77
SRP54-214ENST00000630962 MORN5Q5VZ52 161 aa4□□□□□ -1.77
SRP54-214ENST00000630962 SWSAP1Q6NVH7 229 aa4□□□□□ -1.77
SRP54-214ENST00000630962 KIRREL2Q6UWL6 708 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CATSPERGQ6ZRH7 1159 aa4□□□□□ -1.77
SRP54-214ENST00000630962 NEK8Q86SG6 692 aa4□□□□□ -1.77
SRP54-214ENST00000630962 DGKHQ86XP1 1220 aa4□□□□□ -1.77
SRP54-214ENST00000630962 KRT78Q8N1N4 520 aa4□□□□□ -1.77
SRP54-214ENST00000630962 VGLL2Q8N8G2 317 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CYP2W1Q8TAV3 490 aa4□□□□□ -1.77
SRP54-214ENST00000630962 DNAJB14Q8TBM8 379 aa4□□□□□ -1.77
SRP54-214ENST00000630962 MAML1Q92585 1016 aa4□□□□□ -1.77
SRP54-214ENST00000630962 BRIP1Q9BX63 1249 aa4□□□□□ -1.77
SRP54-214ENST00000630962 C1QTNF7Q9BXJ2 289 aa4□□□□□ -1.77
SRP54-214ENST00000630962 SLC29A3Q9BZD2 475 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CIPCQ9C0C6 399 aa4□□□□□ -1.77
SRP54-214ENST00000630962 PNPLA8Q9NP80 782 aa4□□□□□ -1.77
SRP54-214ENST00000630962 GAR1Q9NY12 217 aaKnown RBP4□□□□□ -1.77
SRP54-214ENST00000630962 STEAP1Q9UHE8 339 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CAPN11Q9UMQ6 739 aa4□□□□□ -1.77
SRP54-214ENST00000630962 CGB1A6NKQ9 187 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 TMEM233B4DJY2 109 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 SMIM22K7EJ46 135 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 AP4M1O00189 453 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 KIF3BO15066 747 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 ANXA2P07355 339 aaKnown RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 CREB1P16220 341 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 EPHB2P29323 1055 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 CARSP49589 748 aaKnown RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 PLCD1P51178 756 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 PGDP52209 483 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 RPS16P62249 146 aaKnown RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 NPY5RQ15761 445 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 TMEM119Q4V9L6 283 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 USP17L6PQ6QN14 398 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 VSTM1Q6UX27 236 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 ZNF813Q6ZN06 617 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 RNF44Q7L0R7 432 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 GALNT16Q8N428 558 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 PNLDC1Q8NA58 520 aaKnown RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 LENG8Q96PV6 779 aaPredicted RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 PRR25Q96S07 402 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 FAM118BQ9BPY3 351 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 EIF2AQ9BY44 585 aaKnown RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 CHST8Q9H2A9 424 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 GEMIN8Q9NWZ8 242 aaKnown RBP3.99□□□□□ -1.77
SRP54-214ENST00000630962 STK32BQ9NY57 414 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 PI4KBQ9UBF8 816 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 MGAT4CQ9UBM8 478 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 DNAJB11Q9UBS4 358 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 DKK4Q9UBT3 224 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 ZNF212Q9UDV6 495 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 ITGB1BP2Q9UKP3 347 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 TNFRSF18Q9Y5U5 241 aa3.99□□□□□ -1.77
SRP54-214ENST00000630962 ARHGEF17Q96PE2 2063 aaPredicted RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 DNAJC9-AS1A6NH13 148 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 TISP43B9A030 160 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 ADAMTS3O15072 1205 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 USP12O75317 370 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 GCATO75600 419 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 MT-CO3P00414 261 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 PRR35P0CG20 571 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 IDEP14735 1019 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 BTF3P20290 206 aaKnown RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 PTGER1P34995 402 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 SSBP2P81877 361 aaPredicted RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 GRM3Q14832 879 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 CYP1B1Q16678 543 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 FAM187BQ17R55 369 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 PTCHD3Q3KNS1 767 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 MTX3Q5HYI7 312 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 C3orf38Q5JPI3 329 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 ANO7Q6IWH7 933 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 MIS18BP1Q6P0N0 1132 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 ZDHHC24Q6UX98 284 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 ZNF782Q6ZMW2 699 aaPredicted RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 CHSY1Q86X52 802 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 KRT73Q86Y46 540 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 WDR75Q8IWA0 830 aaKnown RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 C16orf71Q8IYS4 520 aaPredicted RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 DENND1AQ8TEH3 1009 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 TMEM171Q8WVE6 324 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 PHKBQ93100 1093 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 RPL36ALQ969Q0 106 aaKnown RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 SNX22Q96L94 193 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 TMEM79Q9BSE2 394 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 BHMT2Q9H2M3 363 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 ZNF70Q9UC06 446 aaPredicted RBP3.98□□□□□ -1.77
SRP54-214ENST00000630962 SNX13Q9Y5W8 968 aa3.98□□□□□ -1.77
SRP54-214ENST00000630962 CYP2D7A0A087X1C5 515 aa3.97□□□□□ -1.77
SRP54-214ENST00000630962 A6NNZ2 444 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms