RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 GGPS1O95749 300 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CST3P01034 146 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 TK1P04183 234 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 HPGDP15428 266 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 LSP1P33241 339 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 WNT5AP41221 380 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 MAGEA4P43358 317 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 HAAOP46952 286 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 MAP2K6P52564 334 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CYP4F3Q08477 520 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 PAK1Q13153 545 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 LAMB3Q13751 1172 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 BYSLQ13895 437 aaKnown RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 DPYSQ14117 519 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 EFTUD2Q15029 972 aaKnown RBP eCLIP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 PFKFB3Q16875 520 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 ZRANB3Q5FWF4 1079 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 DEPDC1Q5TB30 811 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC62Q6P9F0 684 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 HOOK3Q86VS8 718 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 HID1Q8IV36 788 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 ZC3H7AQ8IWR0 971 aaKnown RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 AGGF1Q8N302 714 aaeCLIP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 GALNT4Q8N4A0 578 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC24Q8N4L8 307 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 ZNF671Q8TAW3 534 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 GANCQ8TET4 914 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 C19orf60Q96EN9 201 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 FER1L6-AS2Q96M78 137 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 FAM111AQ96PZ2 611 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CDK5RAP1Q96SZ6 601 aaKnown RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 SH3GL2Q99962 352 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 BHLHE41Q9C0J9 482 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 TWSG1Q9GZX9 223 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 NSRP1Q9H0G5 558 aaKnown RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 PCED1AQ9H1Q7 454 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 ABHD16BQ9H3Z7 469 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 XKR8Q9H6D3 395 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 TAB2Q9NYJ8 693 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 RABGEF1Q9UJ41 708 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 C15orf41Q9Y2V0 281 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 NAALAD2Q9Y3Q0 740 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 PCDHA5Q9Y5H7 936 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 FHOD1Q9Y613 1164 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CLCA3PQ9Y6N3 262 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 AHDC1Q5TGY3 1603 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-213ENST00000630925 KIDINS220Q9ULH0 1771 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 MYPNQ86TC9 1320 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 CTTNBP2Q8WZ74 1663 aa5.13□□□□□ -1.59
SDCBP-213ENST00000630925 EME2A4GXA9 379 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 SOWAHBA6NEL2 793 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 URADA6NGE7 173 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 KPNA7A9QM74 516 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CHURC1-FNTBB4DL54 471 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 DNM1LO00429 736 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 TP73O15350 636 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 VEGFDO43915 354 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 DIAPH2O60879 1101 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 F9P00740 461 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 INHBAP08476 426 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 BMPR1AP36894 532 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 PITPNBP48739 271 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 POLGP54098 1239 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CARD18P57730 90 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 RAC3P60763 192 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 EIF4A1P60842 406 aaKnown RBP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ACTR2P61160 394 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 YWHAZP63104 245 aaKnown RBP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ST5P78524 1137 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ARF5P84085 180 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ELP6Q0PNE2 266 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 TRA2AQ13595 282 aaKnown RBP eCLIP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ZNF628Q5EBL2 1059 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 XKR3Q5GH77 459 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 TMEM201Q5SNT2 666 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ATG16L1Q676U5 607 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CIAPIN1Q6FI81 312 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CD302Q8IX05 232 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CNTROBQ8N137 903 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 FAM133AQ8N9E0 248 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ERMNQ8TAM6 284 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 DCAF4Q8WV16 495 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 BRF1Q92994 677 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 NCLNQ969V3 563 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 ZBTB9Q96C00 473 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CTAGE1Q96RT6 745 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 PKP4Q99569 1192 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 KCNJ15Q99712 375 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 OSBPL10Q9BXB5 764 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 QRSL1Q9H0R6 528 aaKnown RBP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 DENND2DQ9H6A0 471 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-213ENST00000630925 WDR26Q9H7D7 661 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 SPO11Q9Y5K1 396 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 POMT1Q9Y6A1 747 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 CAPN7Q9Y6W3 813 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 RTEL1-TNFRSF6BF6WH68 1400 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 EVC2Q86UK5 1308 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 TRAV34A0A0B4J273 112 aa5.12□□□□□ -1.59
SDCBP-213ENST00000630925 LOC100653049A0A140TA62 436 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms