RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 NT5DC3Q86UY8 548 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 SCN4BQ8IWT1 228 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 CTAGE4Q8IX94 777 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 RNF168Q8IYW5 571 aaPredicted RBP10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 ELMOD1Q8N336 334 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 OR10T2Q8NGX3 314 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 OLIG1Q8TAK6 271 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 OVCA2Q8WZ82 227 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 HES6Q96HZ4 224 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 RUNDC3BQ96NL0 473 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 SLITRK1Q96PX8 696 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 WDR24Q96S15 920 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 OSBPL9Q96SU4 736 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 TBCBQ99426 244 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 IRX2Q9BZI1 471 aaPredicted RBP10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 PRDM16Q9HAZ2 1276 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 METTL5Q9NRN9 209 aaKnown RBP10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 HOMER3Q9NSC5 361 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 ABCC13Q9NSE7 274 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 CDY1Q9Y6F8 540 aa10.64□□□□□ -0.71
FOXCUT-201ENST00000628509 C5orf67F2Z3F1 127 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 CLDN5O00501 218 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 KCNK3O14649 394 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 PRPSAP2O60256 369 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 DAB1O75553 588 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 SLU7O95391 586 aaKnown RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 FGF19O95750 216 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 FTCDO95954 541 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 CALCAP01258 141 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 CFHP08603 1231 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 CSH1P0DML2 217 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 CSH2P0DML3 217 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 ATF2P15336 505 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 OR1D2P34982 312 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 MATKP42679 507 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 KPNA1P52294 538 aaPredicted RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RNASE9P60153 205 aaKnown RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RAB33AQ14088 237 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 BOLA3Q53S33 107 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RAB41Q5JT25 222 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 PPP1R15BQ5SWA1 713 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 BTBD8Q5XKL5 378 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 OLFML1Q6UWY5 402 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 DENND5BQ6ZUT9 1274 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 STRADAQ7RTN6 431 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 MON1AQ86VX9 555 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 PSTKQ8IV42 348 aaKnown RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RCOR2Q8IZ40 523 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 STKLD1Q8NE28 680 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 VWCEQ96DN2 955 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 TGS1Q96RS0 853 aaKnown RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 PKMYT1Q99640 499 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 SEPT5Q99719 369 aaPredicted RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RTP3Q9BQQ7 232 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 LMAN2LQ9H0V9 348 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 RRAGDQ9NQL2 400 aaPredicted RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 TLR8Q9NR97 1041 aaKnown RBP10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 TFR2Q9UP52 801 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 ASB3Q9Y575 518 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 PCDHA3Q9Y5H8 950 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 MRFAP1Q9Y605 127 aa10.63□□□□□ -0.71
FOXCUT-201ENST00000628509 TCRBV5S1A1TA0A578 114 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 MTMR11A4FU01 709 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 F8VP50 259 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 CCDC188H7C350 402 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 PGRMC1O00264 195 aaKnown RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 PRRG1O14668 218 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 ENC1O14682 589 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 PAPSS1O43252 624 aaPredicted RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 TBC1D4O60343 1298 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 B4GALT3O60512 393 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 EFEMP2O95967 443 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 LTFP02788 710 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 ATP1A1P05023 1023 aaKnown RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 HAPLN1P10915 354 aaPredicted RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 SLC2A3P11169 496 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 MCM3P25205 808 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 YWHAQP27348 245 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 RFC1P35251 1148 aaPredicted RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 EPHB3P54753 998 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 ITIH3Q06033 890 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 SLC25A52Q3SY17 297 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 PABPC1LQ4VXU2 614 aaKnown RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 RTP2Q5QGT7 225 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 KIAA0319Q5VV43 1072 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 PM20D1Q6GTS8 502 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 CC2D1AQ6P1N0 951 aaPredicted RBP10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 PAQR9Q6ZVX9 377 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 VSIG1Q86XK7 387 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 SCUBE3Q8IX30 993 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 TMEM130Q8N3G9 435 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 ACTRT1Q8TDG2 376 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 SMOQ99835 787 aa10.62□□□□□ -0.71
FOXCUT-201ENST00000628509 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms