RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 POU5F1BQ06416 359 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 PHACTR4Q8IZ21 702 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 EFHD1Q9BUP0 239 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 MARCH2Q9P0N8 246 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 LRRIQ3A6PVS8 624 aaPredicted RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 FOXN1O15353 648 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 PPFIA2O75334 1257 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 RBBP7Q16576 425 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 EMBQ6PCB8 327 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 WDR75Q8IWA0 830 aaKnown RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 ZNF296Q8WUU4 475 aaPredicted RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 SELENONQ9NZV5 590 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 SALL3Q9BXA9 1300 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 ZSCAN5CA6NGD5 496 aaPredicted RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 CSDE1O75534 798 aaKnown RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 SMPD1P17405 629 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 CYP3A5P20815 502 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 HADHAP40939 763 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 C21orf59P57076 290 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 SV2AQ7L0J3 742 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 SPATS2Q86XZ4 545 aaKnown RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 CRLF3Q8IUI8 442 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 KIAA0319LQ8IZA0 1049 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 CYP2W1Q8TAV3 490 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 AHCYL2Q96HN2 611 aaKnown RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 FAM124BQ9H5Z6 455 aaPredicted RBP12.18□□□□□ -0.46
CHD2-205ENST00000625662 PKD2L2Q9NZM6 624 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 TRAF3IP3Q9Y228 551 aa12.18□□□□□ -0.46
CHD2-205ENST00000625662 POLBP06746 335 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 ERVK-10P10266 1014 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SLC9A1P19634 815 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 HMOX2P30519 316 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 ELF2Q15723 593 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 PCSK7Q16549 785 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 HIF1AQ16665 826 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 VSTM1Q6UX27 236 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 ANGPTL8Q6UXH0 198 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SLC35G2Q8TBE7 412 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 OTUB1Q96FW1 271 aaPredicted RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 MRGBPQ9NV56 204 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 MTA2O94776 668 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 RCN2Q14257 317 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 IZUMO3Q5VZ72 239 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 TRIM65Q6PJ69 517 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 CCDC137Q6PK04 289 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 KIAA1324Q6UXG2 1013 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 LCA5Q86VQ0 697 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 NUP93Q8N1F7 819 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 CASP10Q92851 521 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 ACO2Q99798 780 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 RABEP2Q9H5N1 569 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 ZDHHC4Q9NPG8 344 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SMPD4Q9NXE4 827 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 NR2E1Q9Y466 385 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 CTIFO43310 598 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 CTSEP14091 401 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 CYP11B1P15538 503 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 TYK2P29597 1187 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 CXCR5P32302 372 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 PDIA2Q13087 525 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 ZKSCAN8Q15776 578 aaPredicted RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 PPM1NQ8N819 430 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 FAM172AQ8WUF8 416 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHD2-205ENST00000625662 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 SPTLC1O15269 473 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SUN1O94901 812 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SERPINF2P08697 491 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 GFAPP14136 432 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 NLRP9Q7RTR0 991 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 SPATA18Q8TC71 538 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 MRPL40Q9NQ50 206 aaKnown RBP12.17□□□□□ -0.46
CHD2-205ENST00000625662 TMEM161AQ9NX61 479 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 FIS1Q9Y3D6 152 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 PCDHB9Q9Y5E1 797 aa12.17□□□□□ -0.46
CHD2-205ENST00000625662 ZNF536O15090 1300 aa12.16□□□□□ -0.46
CHD2-205ENST00000625662 FRMD3A2A2Y4 597 aa12.16□□□□□ -0.46
CHD2-205ENST00000625662 FGF10O15520 208 aaPredicted RBP12.16□□□□□ -0.46
CHD2-205ENST00000625662 LTFP02788 710 aa12.16□□□□□ -0.46
CHD2-205ENST00000625662 SERPIND1P05546 499 aa12.16□□□□□ -0.46
CHD2-205ENST00000625662 PTPN2P17706 415 aa12.16□□□□□ -0.46
CHD2-205ENST00000625662 HSPA9P38646 679 aaKnown RBP12.16□□□□□ -0.46
CHD2-205ENST00000625662 GRB14Q14449 540 aa12.16□□□□□ -0.46
CHD2-205ENST00000625662 PLCL1Q15111 1095 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms