RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	RPL9	P32969	192 aa	Known RBP	13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PNPLA4	P41247	253 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CCR2	P41597	374 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	NOP14	P78316	857 aa	Known RBP	13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CUL2	Q13617	745 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	GRM2	Q14416	872 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PPP2R5D	Q14738	602 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MTF1	Q14872	753 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TMEM132D	Q14C87	1099 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CYP4A22	Q5TCH4	519 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CELF5	Q8N6W0	485 aa	Known RBP	13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CEP120	Q8N960	986 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	LEMD2	Q8NC56	503 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CXorf38	Q8TB03	319 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	DEPDC1B	Q8WUY9	529 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	KREMEN1	Q96MU8	473 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ZMAT2	Q96NC0	199 aa	Known RBP	13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	DNAI2	Q9GZS0	605 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	NIF3L1	Q9GZT8	377 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	XYLT2	Q9H1B5	865 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TRPV4	Q9HBA0	871 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CYP4F11	Q9HBI6	524 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	GMEB2	Q9UKD1	530 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	UBQLN1	Q9UMX0	589 aa	Known RBP	13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PCDHA13	Q9Y5I0	950 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PTPRJ	Q12913	1337 aa		13.38	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CIT	O14578	2027 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	SEC24A	O95486	1093 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	HARS	P12081	509 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TNNT1	P13805	278 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PSMC3	P17980	439 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MAGEA1	P43355	309 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CCR3	P51677	355 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	EPHA5	P54756	1037 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MLLT6	P55198	1093 aa	Predicted RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	WNT7B	P56706	349 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TFAM	Q00059	246 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MYO1E	Q12965	1108 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	IFI16	Q16666	785 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	LAIR1	Q6GTX8	287 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ALKBH5	Q6P6C2	394 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	VIT	Q6UXI7	678 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TRIM72	Q6ZMU5	477 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PDZD4	Q76G19	769 aa	Predicted RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ARHGEF19	Q8IW93	802 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	EFCAB13	Q8IY85	973 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ELMOD1	Q8N336	334 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	UBR7	Q8N806	425 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	BEST2	Q8NFU1	509 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	FAM3C	Q92520	227 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	SMARCD2	Q92925	531 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	SUSD3	Q96L08	255 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TRMT1	Q9NXH9	659 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	AFF4	Q9UHB7	1163 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ADAMTS1	Q9UHI8	967 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	NAGPA	Q9UK23	515 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	KIAA1257	Q9ULG3	409 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	USP18	Q9UMW8	372 aa		13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	NDRG2	Q9UN36	371 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	REXO2	Q9Y3B8	237 aa	Known RBP	13.37	□□□□□ -0.27
LUC7L3-223	ENST00000625349	COL4A2	P08572	1712 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349		A0A087X0T9	212 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	USP27X	A6NNY8	438 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	NRG2	O14511	850 aa	Predicted RBP	13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	LRP3	O75074	770 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CST3	P01034	146 aa	Predicted RBP	13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	FAM228B	P0C875	321 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ACO1	P21399	889 aa	Known RBP	13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ARHGAP25	P42331	645 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ARPP19	P56211	112 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	CDR2	Q01850	454 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	APBA1	Q02410	837 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	JADE1	Q6IE81	842 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	GJB7	Q6PEY0	223 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	KIAA1328	Q86T90	577 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	C1orf127	Q8N9H9	656 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	APPL2	Q8NEU8	664 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TRIM58	Q8NG06	486 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	TATDN2	Q93075	761 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MSANTD3	Q96H12	275 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ZSWIM3	Q96MP5	696 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	AGPAT1	Q99943	283 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MTMR12	Q9C0I1	747 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ISCU	Q9H1K1	167 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PARD6A	Q9NPB6	346 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	DPP3	Q9NY33	737 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	RAB23	Q9ULC3	237 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	NUB1	Q9Y5A7	615 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PIAS3	Q9Y6X2	628 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	SDK1	Q7Z5N4	2213 aa		13.36	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ANO9	A1A5B4	782 aa		13.35	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ARNTL	O00327	626 aa		13.35	□□□□□ -0.27
LUC7L3-223	ENST00000625349	ZNF263	O14978	683 aa		13.35	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MEFV	O15553	781 aa	Predicted RBP	13.35	□□□□□ -0.27
LUC7L3-223	ENST00000625349	MOSPD3	O75425	235 aa		13.35	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PLEK	P08567	350 aa	Predicted RBP	13.35	□□□□□ -0.27
LUC7L3-223	ENST00000625349	PAEP	P09466	180 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms