RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 GREM1O60565 184 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 DLATP10515 647 aaKnown RBP11.76□□□□□ -0.53
DDX41-218ENST00000625286 CEACAM1P13688 526 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 CASP1P29466 404 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 CDH8P55286 799 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 MYL6P60660 151 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 KDSRQ06136 332 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 MAPRE1Q15691 268 aaKnown RBP11.76□□□□□ -0.53
DDX41-218ENST00000625286 SNRNP35Q16560 246 aaKnown RBP11.76□□□□□ -0.53
DDX41-218ENST00000625286 UAP1L1Q3KQV9 507 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 ETFBKMTQ8IXQ9 262 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 DEFB119Q8N690 84 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 KIAA1958Q8N8K9 716 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 NAT16Q8N8M0 369 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 OR6B3Q8NGW1 331 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 GATA6Q92908 595 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 P2RY11Q96G91 374 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 TRIM9Q9C026 710 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 CD248Q9HCU0 757 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 AGPAT3Q9NRZ7 376 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 IL37Q9NZH6 218 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 MTMR6Q9Y217 621 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 CELSR3Q9NYQ7 3312 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 FAM163BP0C2L3 166 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 MBL2P11226 248 aaPredicted RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 ADH5P11766 374 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 ITPKAP23677 461 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 ANXA13P27216 316 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 EIF2DP41214 584 aaKnown RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 GRIA2P42262 883 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 TNFRSF4P43489 277 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 PPP3CCP48454 512 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 CASP4P49662 377 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 PDE6CP51160 858 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 FAM193AP78312 1265 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 CYP24A1Q07973 514 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 EHHADHQ08426 723 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 PSMD6Q15008 389 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 TDRD10Q5VZ19 366 aaKnown RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 PIP4P1Q86T03 277 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 BBS7Q8IWZ6 715 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 CCDC65Q8IXS2 484 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 HMGB4Q8WW32 186 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 CCDC127Q96BQ5 260 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 CGRRF1Q99675 332 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 SNX25Q9H3E2 840 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 ARHGEF4Q9NR80 690 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 EVLQ9UI08 416 aaPredicted RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 PILRBQ9UKJ0 227 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
DDX41-218ENST00000625286 ATXN2Q99700 1313 aaKnown RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 FASNP49327 2511 aaKnown RBP11.75□□□□□ -0.53
DDX41-218ENST00000625286 A0A1W2PQF6 199 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 TCRBV21S2A2A0A5A6 115 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 E2F8A0AVK6 867 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 TULP3O75386 442 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 BEST1O76090 585 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 APODP05090 189 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 ZDHHC11BP0C7U3 371 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 ENGP17813 658 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 GABRG2P18507 467 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 TNNI1P19237 187 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 YWHAQP27348 245 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 TXLNAP40222 546 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 MAPK8P45983 427 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 NASPP49321 788 aaPredicted RBP11.74□□□□□ -0.53
DDX41-218ENST00000625286 CYP2J2P51589 502 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 SURF1Q15526 300 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 SNX30Q5VWJ9 437 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 PEAR1Q5VY43 1037 aaPredicted RBP11.74□□□□□ -0.53
DDX41-218ENST00000625286 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 LPCAT2Q7L5N7 544 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 C11orf74Q86VG3 221 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 SYT12Q8IV01 421 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 NELFCDQ8IXH7 590 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 NUP93Q8N1F7 819 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 LINC00301Q8NCQ3 95 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 OR2I1PQ8NGU4 316 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 CCDC26Q8TAB7 109 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 ERLEC1Q96DZ1 483 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 ACOX2Q99424 681 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 SMYD3Q9H7B4 428 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 CD93Q9NPY3 652 aa11.74□□□□□ -0.53
DDX41-218ENST00000625286 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
DDX41-218ENST00000625286 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
DDX41-218ENST00000625286 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
DDX41-218ENST00000625286 KNL1Q8NG31 2342 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms