RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 A0A1B0GVT2 93 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 TULP3O75386 442 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 CDC45O75419 566 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 OR52Z1P0C646 297 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 NCAM1P13591 858 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 JUPP14923 745 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 USP46P62068 366 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 SUZ12Q15022 739 aaKnown RBP14.88□□□□□ -0.03
SNX1-214ENST00000625244 KYAT1Q16773 422 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 SCN4BQ8IWT1 228 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 DIS3L2Q8IYB7 885 aaKnown RBP14.88□□□□□ -0.03
SNX1-214ENST00000625244 CHPFQ8IZ52 775 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 GPR174Q9BXC1 333 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 DEC1Q9P2X7 70 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 GTF3C4Q9UKN8 822 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 STARD13Q9Y3M8 1113 aa14.88□□□□□ -0.03
SNX1-214ENST00000625244 TEP1Q99973 2627 aaKnown RBP14.87□□□□□ -0.03
SNX1-214ENST00000625244 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 OGTO15294 1046 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 PLS3P13797 630 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 PFKLP17858 780 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 GAD2Q05329 585 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 RAD51AP2Q09MP3 1159 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 CCDC173Q0VFZ6 552 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 ZNF174Q15697 407 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 KIF19Q2TAC6 998 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 PREPLQ4J6C6 727 aaPredicted RBP14.87□□□□□ -0.03
SNX1-214ENST00000625244 INTS6LQ5JSJ4 861 aaKnown RBP14.87□□□□□ -0.03
SNX1-214ENST00000625244 DCAF12L1Q5VU92 463 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 KIAA1324Q6UXG2 1013 aaKnown RBP14.87□□□□□ -0.03
SNX1-214ENST00000625244 CD302Q8IX05 232 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 SPACA3Q8IXA5 215 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 PDCL2Q8N4E4 241 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 TERB1Q8NA31 727 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 C1orf216Q8TAB5 229 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 WBP1Q96G27 269 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 GABRG3Q99928 467 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 ACBD6Q9BR61 282 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 IGSF5Q9NSI5 407 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 DPP3Q9NY33 737 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 WSB2Q9NYS7 404 aaPredicted RBP14.87□□□□□ -0.03
SNX1-214ENST00000625244 TRPM5Q9NZQ8 1165 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 CPSF3Q9UKF6 684 aaKnown RBP14.87□□□□□ -0.03
SNX1-214ENST00000625244 DNM3Q9UQ16 869 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 CYP46A1Q9Y6A2 500 aa14.87□□□□□ -0.03
SNX1-214ENST00000625244 NOTCH2Q04721 2471 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 ZNF840PA6NDX5 716 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 KCNJ18B7U540 433 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 KCNK3O14649 394 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 TRIM66O15016 1216 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 HCRTO43612 131 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 SLC28A2O43868 658 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 OLFM2O95897 454 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 CDC25AP30304 524 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 IL12RB1P42701 662 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 GRK6P43250 576 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 CSNK1EP49674 416 aaKnown RBP14.86□□□□□ -0.03
SNX1-214ENST00000625244 FOSBP53539 338 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 SMTNP53814 917 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
SNX1-214ENST00000625244 LY6DQ14210 128 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 RTP5Q14D33 572 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 CFAP221Q4G0U5 840 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 CADM4Q8NFZ8 388 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 WASF1Q92558 559 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 FGF11Q92914 225 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 DDX43Q9NXZ2 648 aaKnown RBP14.86□□□□□ -0.03
SNX1-214ENST00000625244 EIF2B4Q9UI10 523 aaKnown RBP14.86□□□□□ -0.03
SNX1-214ENST00000625244 L1RE1Q9UN81 338 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 DERAQ9Y315 318 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 SNX11Q9Y5W9 270 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 SLCO1B1Q9Y6L6 691 aa14.86□□□□□ -0.03
SNX1-214ENST00000625244 SPTAN1Q13813 2472 aaKnown RBP14.85□□□□□ -0.03
SNX1-214ENST00000625244 A0A0B4J269 797 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 METTL12A8MUP2 240 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 HOXC11O43248 304 aaPredicted RBP14.85□□□□□ -0.03
SNX1-214ENST00000625244 KRT10P13645 584 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 C6P13671 934 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 LIG4P49917 911 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 TARDBPQ13148 414 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNX1-214ENST00000625244 SV2CQ496J9 727 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 BTBD8Q5XKL5 378 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 SDE2Q6IQ49 451 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 KCNK18Q7Z418 384 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 SPATA2LQ8IUW3 424 aaPredicted RBP14.85□□□□□ -0.03
SNX1-214ENST00000625244 SNX29Q8TEQ0 813 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 MSTO1Q9BUK6 570 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 LRWD1Q9UFC0 647 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 DOPEY2Q9Y3R5 2298 aa14.85□□□□□ -0.03
SNX1-214ENST00000625244 RELNP78509 3460 aa14.84□□□□□ -0.03
SNX1-214ENST00000625244 WASH3PC4AMC7 463 aa14.84□□□□□ -0.03
SNX1-214ENST00000625244 HNRNPDLO14979 420 aaKnown RBP14.84□□□□□ -0.03
SNX1-214ENST00000625244 PFKFB2O60825 505 aa14.84□□□□□ -0.03
SNX1-214ENST00000625244 ABL1P00519 1130 aa14.84□□□□□ -0.03
SNX1-214ENST00000625244 OAS1P00973 400 aaKnown RBP14.84□□□□□ -0.03
SNX1-214ENST00000625244 GUCY2CP25092 1073 aa14.84□□□□□ -0.03
SNX1-214ENST00000625244 HNF1BP35680 557 aa14.84□□□□□ -0.03
SNX1-214ENST00000625244 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNX1-214ENST00000625244 RHDQ02161 417 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms