RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GLCCI1Q86VQ1 547 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 C8orf58Q8NAV2 365 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CTHRC1Q96CG8 243 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CHST8Q9H2A9 424 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 MID2Q9UJV3 735 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 HDAC9Q9UKV0 1011 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 AMFRQ9UKV5 643 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 OGDHLQ9ULD0 1010 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 PAXBP1Q9Y5B6 917 aa5.37□□□□□ -1.55
BRCA1-229ENST00000621897 FRMPD2Q68DX3 1309 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-229ENST00000621897 CES2O00748 559 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 RGS10O43665 173 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 MAP4K4O95819 1239 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-229ENST00000621897 FGAP02671 866 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 HRGP04196 525 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 PEX2P28328 305 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 KRTAP10-11P60412 298 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 TIAL1Q01085 375 aaKnown RBP eCLIP5.36□□□□□ -1.55
BRCA1-229ENST00000621897 ARHGEF7Q14155 803 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 ZNF750Q32MQ0 723 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 DARS2Q6PI48 645 aaKnown RBP5.36□□□□□ -1.55
BRCA1-229ENST00000621897 SLC2A7Q6PXP3 512 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 MTHFD1LQ6UB35 978 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 BCDIN3DQ7Z5W3 292 aaKnown RBP5.36□□□□□ -1.55
BRCA1-229ENST00000621897 SRGAP1Q7Z6B7 1085 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 ANKRD13AQ8IZ07 590 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 SIRT6Q8N6T7 355 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 TTC8Q8TAM2 541 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 WDYHV1Q96HA8 205 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 VN1R3Q9BXE9 311 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 LRRC27Q9C0I9 530 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 ZNF287Q9HBT7 754 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 OBP2AQ9NY56 170 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 KLHL42Q9P2K6 505 aa5.36□□□□□ -1.55
BRCA1-229ENST00000621897 SMIM35A0A1B0GVV1 85 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 POC1B-GALNT4F8VUJ3 575 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 RAB27BO00194 218 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 PSMD9O00233 223 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 GOLIM4O00461 696 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 SPRY2O43597 315 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 CYP2A6P11509 494 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-229ENST00000621897 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-229ENST00000621897 RHCEP18577 417 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 ACVR2AP27037 513 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 EPHA3P29320 983 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 PRKAR1BP31321 381 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 ARHGAP25P42331 645 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 TIRAPP58753 221 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 RHDQ02161 417 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 LMAN2Q12907 356 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 GFOD2Q3B7J2 385 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 SERPINA13PQ6UXR4 307 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 GALNT4Q8N4A0 578 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 USP22Q9UPT9 525 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 BTBD3Q9Y2F9 522 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 PCDHGB6Q9Y5F9 930 aa5.35□□□□□ -1.55
BRCA1-229ENST00000621897 GOLGA6CA6NDK9 693 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 GOLGA6BA6NDN3 693 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 F8W8V4 182 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 PIAS2O75928 621 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 GOLGA6DP0CG33 693 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 TXNP10599 105 aaKnown RBP5.34□□□□□ -1.55
BRCA1-229ENST00000621897 DIO1P49895 249 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 SUMO2P61956 95 aaKnown RBP5.34□□□□□ -1.55
BRCA1-229ENST00000621897 FAM193AP78312 1265 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 STK3Q13188 491 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 SLC29A2Q14542 456 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 ETFDHQ16134 617 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 AWAT1Q58HT5 328 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 PTCHD4Q6ZW05 846 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 UNC13DQ70J99 1090 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 SFTPA1Q8IWL2 248 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 DHX36Q9H2U1 1008 aaKnown RBP5.34□□□□□ -1.55
BRCA1-229ENST00000621897 AS3MTQ9HBK9 375 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 NRIP3Q9NQ35 241 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 GOLGA6AQ9NYA3 693 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 KLHL13Q9P2N7 655 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 ITGB1BP2Q9UKP3 347 aa5.34□□□□□ -1.55
BRCA1-229ENST00000621897 MGEA5O60502 916 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 NTSR1P30989 418 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 CPT1AP50416 773 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 PGDP52209 483 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 SEMA5AQ13591 1074 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 KCNAB1Q14722 419 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 FAM187BQ17R55 369 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 MORN5Q5VZ52 161 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 C11orf87Q6NUJ2 197 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 PPP4R4Q6NUP7 873 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 GALNT16Q8N428 558 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 METTL25Q8N6Q8 603 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 TIFAQ96CG3 184 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 APOL5Q9BWW9 433 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 DKK4Q9UBT3 224 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 RIMKLBQ9ULI2 386 aa5.33□□□□□ -1.56
BRCA1-229ENST00000621897 CACNA1IQ9P0X4 2223 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 WDR17Q8IZU2 1322 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 KCNU1A8MYU2 1149 aa5.32□□□□□ -1.56
BRCA1-229ENST00000621897 EXOC5O00471 708 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms