RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 CST8O60676 142 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 CIAO1O76071 339 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ARF4P18085 180 aaPredicted RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 ATP6V1C1P21283 382 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 EGFL6Q8IUX8 553 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 VPS37AQ8NEZ2 397 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 RNF112Q9ULX5 631 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 BAIAP2Q9UQB8 552 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 EIF3LQ9Y262 564 aaKnown RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 A0A1W2PQ72 361 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 TRAPPC3O43617 180 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 SYNCRIPO60506 623 aaKnown RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 CCNKO75909 580 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ETFBP38117 255 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 PKNOX1P55347 436 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 USF2Q15853 346 aaPredicted RBP11.97□□□□□ -0.49
CLTC-215ENST00000621829 BPIFB6Q8NFQ5 453 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 CDRT15Q96T59 188 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 C9orf16Q9BUW7 83 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 BCL2L14Q9BZR8 327 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 TUFT1Q9NNX1 390 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 C12orf4Q9NQ89 552 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 ARHGEF10O15013 1369 aa11.97□□□□□ -0.49
CLTC-215ENST00000621829 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 MAPK6Q16659 721 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 CLEC16AQ2KHT3 1053 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 LRRC17Q8N6Y2 441 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 MAGEE2Q8TD90 523 aaPredicted RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 COX4I2Q96KJ9 171 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 NAALADL1Q9UQQ1 740 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 ABCB11O95342 1321 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 CPSF4O95639 269 aaKnown RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 ATP2C1P98194 919 aaPredicted RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 CACHD1Q5VU97 1274 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 EXOC3L1Q86VI1 746 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 PROSER1Q86XN7 944 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 SPATA16Q9BXB7 569 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 RAD18Q9NS91 495 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 TUBGCP4Q9UGJ1 667 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 FYNP06241 537 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 TSPAN19P0C672 248 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 IST1P53990 364 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 HSF2Q03933 536 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 TRAP1Q12931 704 aaKnown RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 THEM5Q8N1Q8 247 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 LRRC20Q8TCA0 184 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 PAFAH2Q99487 392 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 YIPF2Q9BWQ6 316 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 CAPN6Q9Y6Q1 641 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 EDC4Q6P2E9 1401 aaKnown RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 ATXN2Q99700 1313 aaKnown RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 CCNA2P20248 432 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 NAA20P61599 178 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 ZIK1Q3SY52 487 aaPredicted RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 CDC73Q6P1J9 531 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 MACC1Q6ZN28 852 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLTC-215ENST00000621829 FAM136AQ96C01 138 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 AK5Q9Y6K8 562 aa11.96□□□□□ -0.49
CLTC-215ENST00000621829 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
CLTC-215ENST00000621829 PSIP1O75475 530 aaKnown RBP11.96□□□□□ -0.5
CLTC-215ENST00000621829 APOA4P06727 396 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 TGM2P21980 687 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 OLFML2AQ68BL7 652 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 SKA1Q96BD8 255 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 ZNF446Q9NWS9 450 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 COMMD9Q9P000 198 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 EMC3Q9P0I2 261 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 OGDHLQ9ULD0 1010 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 DOLKQ9UPQ8 538 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 TDRKHQ9Y2W6 561 aaKnown RBP11.96□□□□□ -0.5
CLTC-215ENST00000621829 CSADQ9Y600 493 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 DUOX2Q9NRD8 1548 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 ZSCAN5CA6NGD5 496 aaPredicted RBP11.96□□□□□ -0.5
CLTC-215ENST00000621829 USP17L5A8MUK1 530 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.5
CLTC-215ENST00000621829 ENTPD5O75356 428 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 GTF2H1P32780 548 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 FMO5P49326 533 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 RPL10AP62906 217 aaKnown RBP11.96□□□□□ -0.5
CLTC-215ENST00000621829 EIF3MQ7L2H7 374 aaKnown RBP11.96□□□□□ -0.5
CLTC-215ENST00000621829 ATPAF2Q8N5M1 289 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 FAR1Q8WVX9 515 aa11.96□□□□□ -0.5
CLTC-215ENST00000621829 S100ZQ8WXG8 99 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms