RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 NKX1-2Q9UD57 310 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 GTF2IRD1Q9UHL9 959 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 BAIAP2L1Q9UHR4 511 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 KCNH4Q9UQ05 1017 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CHMP2BQ9UQN3 213 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ZNF148Q9UQR1 794 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 USP3Q9Y6I4 520 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 NUP214P35658 2090 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 COL1A2P08123 1366 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CCDC88CQ9P219 2028 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PDE4DIPQ5VU43 2346 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 HELZP42694 1942 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 HTTP42858 3142 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 LOC102724159A0A0B4J2E5 919 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TCRBV9S1A1TA0A576 114 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 RBM47A0AV96 593 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 BCLAF3A2AJT9 711 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 HMX2A2RU54 273 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CFAP69A5D8W1 941 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 FAM159BA6NKW6 160 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CXorf49A8MYA2 514 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 M0QYV0 167 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 KLF11O14901 512 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 MCF2LO15068 1137 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 MDM4O15151 490 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TM9SF1O15321 606 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CHADO15335 359 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PAPSS1O43252 624 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 HBP1O60381 514 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TSPAN1O60635 241 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 UGT1A9O60656 530 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 DNAJC6O75061 913 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 SNNO75324 88 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 RFPL1O75677 317 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PIAS1O75925 651 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 DCTN3O75935 186 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CBX6O95503 412 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 GSRP00390 522 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 IFNB1P01574 187 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 HMGCRP04035 888 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 ITGB3P05106 788 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PRKCGP05129 697 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 LGALS2P05162 132 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PGK2P07205 417 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 DLDP09622 509 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 SRGAP2CP0DJJ0 459 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TPBGLP0DKB5 382 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CSH1P0DML2 217 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CSH2P0DML3 217 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 RBP3P10745 1247 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 VDRP11473 427 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 KRT3P12035 628 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CD19P15391 556 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 ARF4P18085 180 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 KRT4P19013 534 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TFE3P19532 575 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 TPSB2P20231 275 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 GPD1P21695 349 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TGM2P21980 687 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CCND1P24385 295 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PRKCHP24723 683 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TARSP26639 723 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 MARK3P27448 753 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 EPHB2P29323 1055 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 POLR2BP30876 1174 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 ATICP31939 592 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 GJA5P36382 358 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CETN2P41208 172 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 ELK3P41970 407 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 SSR1P43307 286 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 PTPN9P43378 593 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 NDST1P52848 882 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CDH6P55285 790 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 HDAC4P56524 1084 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 SLC8A3P57103 927 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 GEMIN4P57678 1058 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 EIF3EP60228 445 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 DYNLT1P63172 113 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 LACTBP83111 547 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 CDK16Q00536 496 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 OCRLQ01968 901 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 ROR1Q01973 937 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 FAAP100Q0VG06 881 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 SLC10A2Q12908 348 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 PTK7Q13308 1070 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TUBB3Q13509 450 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 PWP2Q15269 919 aaKnown RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 TPSAB1Q15661 275 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 KLHL38Q2WGJ6 581 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 SLC10A6Q3KNW5 377 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 BBS9Q3SYG4 887 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 KBTBD12Q3ZCT8 623 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 CCDC14Q49A88 953 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 WASHC2DQ5SRD0 308 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 GJC2Q5T442 439 aaPredicted RBP3.37□□□□□ -1.87
U1.39-201ENST00000621562 HHATQ5VTY9 493 aa3.37□□□□□ -1.87
U1.39-201ENST00000621562 TAPT1Q6NXT6 567 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms