RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SPOPLQ6IQ16 392 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 PRR23CQ6ZRP0 262 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 CEP68Q76N32 757 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 FILIP1Q7Z7B0 1213 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 C12orf40Q86WS4 652 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 SYNPOQ8N3V7 929 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 SCAMP5Q8TAC9 235 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 GAB3Q8WWW8 586 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 CD101Q93033 1021 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 SECISBP2LQ93073 1101 aaKnown RBP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 ZFRQ96KR1 1074 aaKnown RBP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 ZDHHC4Q9NPG8 344 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 RCOR1Q9UKL0 485 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 CPQQ9Y646 472 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 LAMA5O15230 3695 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 PVALEFA0A1B0GWK0 134 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 A8MXQ7 604 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 K7EQS6 105 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 EXOC3O60645 756 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 RPP40O75818 363 aaKnown RBP12.17□□□□□ -0.46
CPNE3-210ENST00000621245 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
CPNE3-210ENST00000621245 ABL1P00519 1130 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 CCDC130P13994 396 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 CD46P15529 392 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 TCF3P15923 654 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 DRD1P21728 446 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 ANXA13P27216 316 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 SLC6A11P48066 632 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
CPNE3-210ENST00000621245 BIRC3Q13489 604 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 NCOA4Q13772 614 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 ZNF699Q32M78 642 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 FAM35AQ86V20 835 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 ZMIZ2Q8NF64 920 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 C8orf48Q96LL4 319 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 ARRDC1-AS1Q9H2J1 176 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 FAM13BQ9NYF5 915 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 TRPM5Q9NZQ8 1165 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 HPSEQ9Y251 543 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 INVSQ9Y283 1065 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 R3HCC1Q9Y3T6 440 aaKnown RBP12.17□□□□□ -0.46
CPNE3-210ENST00000621245 CACNA1BQ00975 2339 aa12.17□□□□□ -0.46
CPNE3-210ENST00000621245 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 BEST1O76090 585 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 EPN2O95208 641 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 CLDN10P78369 228 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 SLC7A9P82251 487 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 PSMD2Q13200 908 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 TRPC3Q13507 836 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 DMC1Q14565 340 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
CPNE3-210ENST00000621245 CSRP2Q16527 193 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 TCEAL6Q6IPX3 200 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 GPRIN1Q7Z2K8 1008 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 FUKQ8N0W3 1084 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 GPR161Q8N6U8 529 aaKnown RBP12.16□□□□□ -0.46
CPNE3-210ENST00000621245 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 TCEAL3Q969E4 200 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 TWNKQ96RR1 684 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 ELOVL4Q9GZR5 314 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 GOLPH3LQ9H4A5 285 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 GMIPQ9P107 970 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 CFAP97Q9P2B7 532 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 SLC8A2Q9UPR5 921 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 PI4KAP42356 2102 aa12.16□□□□□ -0.46
CPNE3-210ENST00000621245 PRR5-ARHGAP8B1AHC4 643 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 SLC30A4O14863 429 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 COCHO43405 550 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 PHACTR2O75167 634 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 NR3C1P04150 777 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.46
CPNE3-210ENST00000621245 CNR2P34972 360 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 ASPAP45381 313 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 NDUFA8P51970 172 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 SLC5A3P53794 718 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 SNRPFP62306 86 aaKnown RBP12.15□□□□□ -0.46
CPNE3-210ENST00000621245 ARHGAP8P85298 464 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 KDSRQ06136 332 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 CCDC33Q8N5R6 958 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 USP33Q8TEY7 942 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-210ENST00000621245 SMOQ99835 787 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 DUSP15Q9H1R2 295 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-210ENST00000621245 VRTNQ9H8Y1 702 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms