RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 TRAPPC3O43617 180 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 MGEA5O60502 916 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 SCTRP47872 440 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 TMED10P49755 219 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 CAV1Q03135 178 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 AUHQ13825 339 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 PIGHQ14442 188 aaPredicted RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 STAT4Q14765 748 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 SLC39A4Q6P5W5 647 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 MFN1Q8IWA4 741 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ADAM32Q8TC27 787 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 DEPDC1BQ8WUY9 529 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 BHMTQ93088 406 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 C12orf65Q9H3J6 166 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 NXF3Q9H4D5 531 aaKnown RBP9.45□□□□□ -0.9
GGA3-222ENST00000621217 MINDY3Q9H8M7 445 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 LRRC4CQ9HCJ2 640 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 ABCF3Q9NUQ8 709 aa9.45□□□□□ -0.9
GGA3-222ENST00000621217 LPXNO60711 386 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 AP1G2O75843 785 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 CYP1A2P05177 515 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 CPA2P48052 419 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 PKN2Q16513 984 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 AGGF1Q8N302 714 aaeCLIP9.44□□□□□ -0.9
GGA3-222ENST00000621217 RASGEF1CQ8N431 466 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 FBXO36Q8NEA4 188 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 RNF139Q8WU17 664 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 C12orf42Q96LP6 360 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 ACO2Q99798 780 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 UBN1Q9NPG3 1134 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 XPNPEP3Q9NQH7 507 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 APOEP02649 317 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 GSTA2P09210 222 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SMIM10L2AP0DMW4 78 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SMIM10L2BP0DMW5 78 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 CPB1P15086 417 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SMPD1P17405 629 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SERPINB3P29508 390 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SLC26A2P50443 739 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 NOMO3P69849 1222 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 PTPN11Q06124 597 aaPredicted RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 SREBF2Q12772 1141 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 CCDC14Q49A88 953 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 TFDP3Q5H9I0 405 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 TRIM42Q8IWZ5 723 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 LRRC43Q8N309 656 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 MREGQ8N565 214 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 C18orf25Q96B23 403 aaPredicted RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 DHX33Q9H6R0 707 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 NDE1Q9NXR1 346 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 PPARGC1AQ9UBK2 798 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 TJP2Q9UDY2 1190 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 NFASCO94856 1347 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 GPR25O00155 361 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 IGF2BP3O00425 579 aaKnown RBP eCLIP9.44□□□□□ -0.9
GGA3-222ENST00000621217 ZWINTO95229 277 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 PSEN2P49810 448 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 FASTKD3Q14CZ7 662 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 C16orf87Q6PH81 154 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 DEFB128Q7Z7B8 93 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 SLFN11Q7Z7L1 901 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 PCGF5Q86SE9 256 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 FAM131BQ86XD5 332 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 ZNF677Q86XU0 584 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 WDR49Q8IV35 697 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 EIF1ADQ8N9N8 165 aaKnown RBP9.44□□□□□ -0.9
GGA3-222ENST00000621217 GPR88Q9GZN0 384 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 PDP2Q9P2J9 529 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 STXBP5LQ9Y2K9 1186 aa9.44□□□□□ -0.9
GGA3-222ENST00000621217 MANSC4A6NHS7 340 aaPredicted RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 GOLGA8CPA6NN73 597 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 FSBPO95073 299 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 EIF4BP23588 611 aaKnown RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 AP3M2P53677 418 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 TFDP2Q14188 446 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 NXNQ6DKJ4 435 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 EXOC3L1Q86VI1 746 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 JOSD2Q8TAC2 188 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 RXFP2Q8WXD0 754 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 PGLYRP2Q96PD5 576 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 ZFP69BQ9UJL9 534 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 TSPAN16Q9UKR8 245 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 TSC22D4Q9Y3Q8 395 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 MYPNQ86TC9 1320 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 BCORQ6W2J9 1755 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 GAS2O43903 313 aaKnown RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 IL18RAPO95256 599 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 TPP2P29144 1249 aaPredicted RBP9.43□□□□□ -0.9
GGA3-222ENST00000621217 AP2B1P63010 937 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 BMPR2Q13873 1038 aa9.43□□□□□ -0.9
GGA3-222ENST00000621217 CCNG2Q16589 344 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms