RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 BRCC3P46736 316 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ATXN1P54253 815 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 SARNPP82979 210 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 MGAT3Q09327 533 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 GPS1Q13098 491 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 CCDC14Q49A88 953 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 PIGZQ86VD9 579 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 TOP6BLQ8N6T0 577 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 EIF1ADQ8N9N8 165 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 C3orf58Q8NDZ4 430 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 FNIP1Q8TF40 1166 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 RSAD2Q8WXG1 361 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SEC14L1Q92503 715 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SEMA4AQ9H3S1 761 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 HMX1Q9NP08 348 aaPredicted RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 HEY1Q9Y5J3 304 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SETSIPP0DME0 302 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 TFE3P19532 575 aaPredicted RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 MAGEA9P43362 315 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 PTK6Q13882 451 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ZC3H12AQ5D1E8 599 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 XKR4Q5GH76 650 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ARHGAP17Q68EM7 881 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 NPNTQ6UXI9 565 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 POLNQ7Z5Q5 900 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 CCDC33Q8N5R6 958 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 GLIS1Q8NBF1 620 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SYT15Q9BQS2 421 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 GIT1Q9Y2X7 761 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 GOLGA8MH3BSY2 632 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 CHKAP35790 457 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 COPS2P61201 443 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 LMNB2Q03252 620 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 PTK7Q13308 1070 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 MTM1Q13496 603 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 GSTCDQ8NEC7 633 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 LRRN4Q8WUT4 740 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 PGBD4Q96DM1 585 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 DHX35Q9H5Z1 703 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 H7C0C1 242 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 AP1G2O75843 785 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 SHBGP04278 402 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 FAM200BP0CF97 657 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 WARSP23381 471 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 LRPAP1P30533 357 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 ATP5OP48047 213 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 VEGFBP49765 207 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 RNASELQ05823 741 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 ZNF844Q08AG5 666 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 SLC29A2Q14542 456 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 DCAF6Q58WW2 860 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 METTL23Q86XA0 190 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 CRYBG2Q8N1P7 616 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 ART4Q93070 314 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 RHOBTB2Q9BYZ6 727 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 TRIM17Q9Y577 477 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 MYBPHLA2RUH7 354 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 CAPN9O14815 690 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 PPFIA2O75334 1257 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 BEST1O76090 585 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 ITIH2P19823 946 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 NDUFV1P49821 464 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 SULT1E1P49888 294 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 DRG2P55039 364 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 VCPP55072 806 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 EIF3EP60228 445 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 NME3Q13232 169 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 DARS2Q6PI48 645 aaKnown RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 SYDE1Q6ZW31 735 aaPredicted RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 TMEM110Q86TL2 294 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 MAP7D3Q8IWC1 876 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 FUKQ8N0W3 1084 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 EXOC4Q96A65 974 aa10.38□□□□□ -0.75
VTA1-205ENST00000620996 FAM124BQ9H5Z6 455 aaPredicted RBP10.38□□□□□ -0.75
VTA1-205ENST00000620996 SCN10AQ9Y5Y9 1956 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 A0A1W2PQ45 241 aaPredicted RBP10.37□□□□□ -0.75
VTA1-205ENST00000620996 A0A1W2PQY0 241 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 F8W810 466 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 MCF2LO15068 1137 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 GABBR2O75899 941 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 CABYRO75952 493 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 CKBP12277 381 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 NPR3P17342 541 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 RAB27AP51159 221 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 APLP1P51693 650 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 SLMAPQ14BN4 828 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 PKDCCQ504Y2 493 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 TIGD5Q53EQ6 642 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 CCSAPQ6IQ19 270 aaPredicted RBP10.37□□□□□ -0.75
VTA1-205ENST00000620996 CTU1Q7Z7A3 348 aaKnown RBP10.37□□□□□ -0.75
VTA1-205ENST00000620996 FAM131BQ86XD5 332 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 SPATA18Q8TC71 538 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 SH3GL2Q99962 352 aa10.37□□□□□ -0.75
VTA1-205ENST00000620996 DDX23Q9BUQ8 820 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms