RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TMEM130Q8N3G9 435 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 PDCD7Q8N8D1 485 aaKnown RBP21.25■□□□□ 0.99
NEK3-208ENST00000618534 STMN2Q93045 179 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 TEX13BQ9BXU2 312 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 ADAMTS5Q9UNA0 930 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 LRCH1Q9Y2L9 728 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.25■□□□□ 0.99
NEK3-208ENST00000618534 IGKV6D-21A0A0A0MT36 114 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 KLF11O14901 512 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 RNF8O76064 485 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 C1QAP02745 245 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 SRGAP2CP0DJJ0 459 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 YWHAZP63104 245 aaKnown RBP21.25■□□□□ 0.99
NEK3-208ENST00000618534 OCRLQ01968 901 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 TTC39BQ5VTQ0 682 aaPredicted RBP21.25■□□□□ 0.99
NEK3-208ENST00000618534 IRGCQ6NXR0 463 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 RSAD1Q9HA92 442 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 KAT6AQ92794 2004 aa21.25■□□□□ 0.99
NEK3-208ENST00000618534 CXorf49A8MYA2 514 aaPredicted RBP21.24■□□□□ 0.99
NEK3-208ENST00000618534 SPAG6O75602 509 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 PGM1P36871 562 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 THOC5Q13769 683 aaKnown RBP21.24■□□□□ 0.99
NEK3-208ENST00000618534 TNFAIP1Q13829 316 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 RCN2Q14257 317 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 STXBP2Q15833 593 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 RAB6CQ53S08 254 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 SH3PXD2AQ5TCZ1 1133 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 RAB6CQ9H0N0 254 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 RAB6BQ9NRW1 208 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.24■□□□□ 0.99
NEK3-208ENST00000618534 DLGAP2Q9P1A6 1054 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 WDR35Q9P2L0 1181 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 HMGXB4Q9UGU5 601 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 H7C0C1 242 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 PRKCBP05771 671 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 SP100P23497 879 aaPredicted RBP21.24■□□□□ 0.99
NEK3-208ENST00000618534 STIP1P31948 543 aaKnown RBP21.24■□□□□ 0.99
NEK3-208ENST00000618534 ATP5OP48047 213 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 EFNA5P52803 228 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 CDH6P55285 790 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 HSF5Q4G112 596 aaPredicted RBP21.24■□□□□ 0.99
NEK3-208ENST00000618534 CES4AQ5XG92 561 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 FAM91A1Q658Y4 838 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 RFX8Q6ZV50 586 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 TREML1Q86YW5 311 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 FBXO27Q8NI29 283 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 TWNKQ96RR1 684 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 SDCBP2Q9H190 292 aa21.24■□□□□ 0.99
NEK3-208ENST00000618534 STX18Q9P2W9 335 aaKnown RBP21.24■□□□□ 0.99
NEK3-208ENST00000618534 CHADO15335 359 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 TNNC2P02585 160 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 KRT19P08727 400 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 UBA1P22314 1058 aaKnown RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 AMPD1P23109 780 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 ICAM3P32942 547 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 NBPF12Q5TAG4 269 aaPredicted RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 FAXCQ5TGI0 409 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 C1orf228Q6PIY5 440 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 CEP120Q8N960 986 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 ZNF280CQ8ND82 737 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 ZNF395Q9H8N7 513 aaPredicted RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 PNPLA8Q9NP80 782 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 NRBP2Q9NSY0 501 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 SPATS2LQ9NUQ6 558 aaKnown RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 WASF2Q9Y6W5 498 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 DOCK1Q14185 1865 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 CCDC195A0A1B0GUA6 201 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 H3BRJ5 948 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 I3L4J1 428 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 MAFO75444 373 aaPredicted RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 NPTXRO95502 500 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 ENO1P06733 434 aaKnown RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 BST1Q10588 318 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 SURF1Q15526 300 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 MDH1BQ5I0G3 518 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 PAXIP1Q6ZW49 1069 aaPredicted RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 CDR2LQ86X02 465 aaPredicted RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 PLLPQ9Y342 182 aa21.23■□□□□ 0.99
NEK3-208ENST00000618534 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.23■□□□□ 0.99
NEK3-208ENST00000618534 B2RBV5 119 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 SKIP12755 728 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 HSPA1LP34931 641 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 MRPS5P82675 430 aaKnown RBP21.22■□□□□ 0.99
NEK3-208ENST00000618534 TMPRSS15P98073 1019 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 BMPR2Q13873 1038 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 FAM102AQ5T9C2 384 aaPredicted RBP21.22■□□□□ 0.99
NEK3-208ENST00000618534 CYP4V2Q6ZWL3 525 aaPredicted RBP21.22■□□□□ 0.99
NEK3-208ENST00000618534 ARID3BQ8IVW6 561 aaPredicted RBP21.22■□□□□ 0.99
NEK3-208ENST00000618534 SPDYE1Q8NFV5 336 aaPredicted RBP21.22■□□□□ 0.99
NEK3-208ENST00000618534 MCRS1Q96EZ8 462 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 ANKRD36BP1Q96IX9 119 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 FAM161BQ96MY7 647 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 PLAC1Q9HBJ0 212 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 POPDC2Q9HBU9 364 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 KCNK4Q9NYG8 393 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 FZD1Q9UP38 647 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 MGAMO43451 1857 aa21.22■□□□□ 0.99
NEK3-208ENST00000618534 CAPN14A8MX76 684 aa21.21■□□□□ 0.99
NEK3-208ENST00000618534 UGT1A9O60656 530 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms