RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PPP3CCP48454 512 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 SRBD1Q8N5C6 995 aaKnown RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 APBB2Q92870 758 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ERMAPQ96PL5 475 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 KIAA1586Q9HCI6 787 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 AKAP7Q9P0M2 348 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 INO80B-WBP1J3KQ70 363 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ANXA6P08133 673 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 SCNN1BP51168 640 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 FOXR1Q6PIV2 292 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 MEIOBQ8N635 442 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 NFATC2IPQ8NCF5 419 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 SCFD2Q8WU76 684 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 INO80BQ9C086 356 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 NPC1L1Q9UHC9 1359 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 CACNA1FO60840 1977 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 FAM196BA6NMK8 535 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 CCRL2O00421 344 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 GLRA3O75311 464 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ITIH1P19827 911 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 MAPK7Q13164 816 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 MSLNQ13421 630 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 PROSER1Q86XN7 944 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 STK33Q9BYT3 514 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 SP110Q9HB58 689 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 EIF3LQ9Y262 564 aaKnown RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 PKP3Q9Y446 797 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 PPIL6Q8IXY8 311 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ULK2Q8IYT8 1036 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 LSM14AQ8ND56 463 aaKnown RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 SRRM3A6NNA2 597 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ME2P23368 584 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 IFNAR1P17181 557 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 NFYCQ13952 458 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 SMCO1Q147U7 214 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ART5Q96L15 291 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF699Q32M78 642 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 ZMYM1Q5SVZ6 1142 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 GPATCH4Q5T3I0 446 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 MAGEC3Q8TD91 643 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 FOPNLQ96NB1 174 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 VIRMAQ69YN4 1812 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 UFL1O94874 794 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 RPL19P84098 196 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 ORC2Q13416 577 aaPredicted RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 AGAP9Q5VTM2 703 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 EPB41L4BQ9H329 900 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 PAK5Q9P286 719 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 CENPCQ03188 943 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 PIGHQ14442 188 aaPredicted RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 EFHC2Q5JST6 749 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 SEPHS2Q99611 448 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 IFNA14P01570 189 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 TRIM32Q13049 653 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 EIF4A2Q14240 407 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 TOR1AIP2Q8NFQ8 470 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 EDC3Q96F86 508 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 OSBPL6Q9BZF3 934 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 FLT4P35916 1363 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 PPM1BO75688 479 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 PAICSP22234 425 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 FGFR3P22607 806 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 ANXA11P50995 505 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 CCR3P51677 355 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 ALFQ53S48 1182 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 C4orf22Q6V702 233 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 RASGRP4Q8TDF6 673 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 SSH3Q8TE77 659 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 BCL2L14Q9BZR8 327 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 TRMUO75648 421 aaKnown RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 POU4F1Q01851 419 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 NAT14Q8WUY8 206 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 GOLPH3Q9H4A6 298 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 COPS7BQ9H9Q2 264 aaPredicted RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 C3orf70A6NLC5 250 aaPredicted RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 PDE8AO60658 829 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 RARGP13631 454 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 DDB1Q16531 1140 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 FRMD5Q7Z6J6 570 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 SPATA18Q8TC71 538 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 S100PBPQ96BU1 408 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 FAM89AQ96GI7 184 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 OXNAD1Q96HP4 312 aaPredicted RBP15.48■□□□□ 0.07
COL5A1-208ENST00000618395 IRAK3Q9Y616 596 aa15.48■□□□□ 0.07
COL5A1-208ENST00000618395 PSMD11O00231 422 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 IL18R1Q13478 541 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF613Q6PF04 617 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 TBC1D19Q8N5T2 526 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SNX31Q8N9S9 440 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 TRPV1Q8NER1 839 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 KLF6Q99612 283 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 PHACTR1Q9C0D0 580 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 COQ6Q9Y2Z9 468 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 MYO9BQ13459 2157 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms