RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 GPNMBQ14956 572 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 STILQ15468 1287 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 ODF2Q5BJF6 829 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 AGBL2Q5U5Z8 902 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 SLC35B2Q8TB61 432 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.53
CNOT3-209ENST00000617930 GRK7Q8WTQ7 553 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 DDX23Q9BUQ8 820 aaKnown RBP18.33■□□□□ 0.53
CNOT3-209ENST00000617930 NOD1Q9Y239 953 aa18.33■□□□□ 0.53
CNOT3-209ENST00000617930 E7EVH7 732 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 RIPK2O43353 540 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 ENDOD1O94919 500 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 GAS8O95995 478 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 KRT7P08729 469 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 MLH1P40692 756 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 ARSEP51690 589 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 C1QTNF8P60827 252 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 CALCOCO2Q13137 446 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 CDO1Q16878 200 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 FAM182AQ5T1J6 154 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 AGMOQ6ZNB7 445 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 ALLCQ8N6M5 410 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 HSPH1Q92598 858 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 GAD1Q99259 594 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 CNPY3Q9BT09 278 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 TMEM121Q9BTD3 319 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 MIS12Q9H081 205 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 RNF208Q9H0X6 261 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 MTRF1LQ9UGC7 380 aaKnown RBP18.33■□□□□ 0.52
CNOT3-209ENST00000617930 OGDHLQ9ULD0 1010 aa18.33■□□□□ 0.52
CNOT3-209ENST00000617930 DNM1LO00429 736 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 CST8O60676 142 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ATF2P15336 505 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 PCK1P35558 622 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 RPL34P49207 117 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ATP11AP98196 1134 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 SLC6A3Q01959 620 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 PAQR9Q6ZVX9 377 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 CCDC25Q86WR0 208 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 FAM126BQ8IXS8 530 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ANKRD52Q8NB46 1076 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 C3orf58Q8NDZ4 430 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 MYCBPAPQ8TBZ2 947 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 SLC2A14Q8TDB8 520 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 LINC01599Q8WXQ3 324 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 PAAF1Q9BRP4 392 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 SRRM3A6NNA2 597 aaPredicted RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 CAND2O75155 1236 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 BEST1O76090 585 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 PECAM1P16284 738 aaPredicted RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 IL4RP24394 825 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ACAT1P24752 427 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 SEC24CP53992 1094 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 VCPP55072 806 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 GDF10P55107 478 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ACAP1Q15027 740 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 HADHQ16836 314 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 BBS12Q6ZW61 710 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 RTN4RL1Q86UN2 441 aaPredicted RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ADGRF2Q8IZF7 708 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ACTL9Q8TC94 416 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 NKD2Q969F2 451 aaPredicted RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ZNF560Q96MR9 790 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 MAGEB5Q9BZ81 275 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 CDC42EP4Q9H3Q1 356 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 PPANQ9NQ55 473 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ASNSD1Q9NWL6 643 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 ZNF148Q9UQR1 794 aa18.32■□□□□ 0.52
CNOT3-209ENST00000617930 DRG1Q9Y295 367 aaKnown RBP18.32■□□□□ 0.52
CNOT3-209ENST00000617930 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 VGLL3A8MV65 326 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 CETN2P41208 172 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 PNPLA4P41247 253 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 ATXN1P54253 815 aaKnown RBP18.31■□□□□ 0.52
CNOT3-209ENST00000617930 OTUD4Q01804 1114 aaKnown RBP18.31■□□□□ 0.52
CNOT3-209ENST00000617930 WSCD1Q658N2 575 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 HIBCHQ6NVY1 386 aaPredicted RBP18.31■□□□□ 0.52
CNOT3-209ENST00000617930 OTUD6BQ8N6M0 293 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 KCTD6Q8NC69 237 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 STK32AQ8WU08 396 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
CNOT3-209ENST00000617930 CCT8L2Q96SF2 557 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 TSPAN18Q96SJ8 248 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 ANAPC5Q9UJX4 755 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 EFR3BQ9Y2G0 817 aa18.31■□□□□ 0.52
CNOT3-209ENST00000617930 CLDN5O00501 218 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 GPR182O15218 404 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 RNF8O76064 485 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 FAM107AO95990 144 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 SETSIPP0DME0 302 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 CLCNKBP51801 687 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 PPP2R2AP63151 447 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 CA9Q16790 459 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 P3H1Q32P28 736 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 SV2CQ496J9 727 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms