RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 CNTN3Q9P232 1028 aa13.5□□□□□ -0.25
CLTCL1-210ENST00000617926 WDR35Q9P2L0 1181 aa13.5□□□□□ -0.25
CLTCL1-210ENST00000617926 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
CLTCL1-210ENST00000617926 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
CLTCL1-210ENST00000617926 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
CLTCL1-210ENST00000617926 SPDYE16A6NNV3 312 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 KLF11O14901 512 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 OGTO15294 1046 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 MSCO60682 206 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 KRT3P12035 628 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 EFNA5P52803 228 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 ACAP1Q15027 740 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 DUOXA2Q1HG44 320 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 FAM110CQ1W6H9 321 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 SEZ6Q53EL9 994 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 CAPRIN2Q6IMN6 1127 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 APLFQ8IW19 511 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 KIAA0319LQ8IZA0 1049 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 PTPRN2Q92932 1015 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 MRPL4Q9BYD3 311 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 ZWILCHQ9H900 591 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 KCNK13Q9HB14 408 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 ARL8BQ9NVJ2 186 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 XPO7Q9UIA9 1087 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 TEX264Q9Y6I9 313 aa13.49□□□□□ -0.25
CLTCL1-210ENST00000617926 CCDC189A1A4V9 331 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 MED7O43513 233 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 LPXNO60711 386 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 CNMDO75829 334 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 ENDOD1O94919 500 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 MT-ND3P03897 115 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 HOXC6P09630 235 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 PTDSS1P48651 473 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 EIF3EP60228 445 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 DYNLT1P63172 113 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 GRIK3Q13003 919 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 KCNJ11Q14654 390 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 BBS9Q3SYG4 887 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 ANO7Q6IWH7 933 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 XYLT1Q86Y38 959 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 PALM2Q8IXS6 379 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 NSL1Q96IY1 281 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 PCYT2Q99447 389 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 ACO2Q99798 780 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 TEX13BQ9BXU2 312 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 OSBPL1AQ9BXW6 950 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 ZFATQ9P243 1243 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 SAE1Q9UBE0 346 aaPredicted RBP13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 RBPJLQ9UBG7 517 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 CYTH4Q9UIA0 394 aa13.48□□□□□ -0.25
CLTCL1-210ENST00000617926 TCRBV9S1A1TA0A576 114 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 MCF2LO15068 1137 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 CHADO15335 359 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 ENTPD5O75356 428 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 MAFO75444 373 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 NEBLO76041 1014 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 C1QAP02745 245 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 DLDP09622 509 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 HARSP12081 509 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 PSMC4P43686 418 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 ARFIP2P53365 341 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 PTK7Q13308 1070 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 TRPC3Q13507 836 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 DPYSL3Q14195 570 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 NOMO1Q15155 1222 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 SMTNL2Q2TAL5 461 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 Q3C1V9 767 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 IGDCC3Q8IVU1 814 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 LMNTD2Q8IXW0 634 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 DNERQ8NFT8 737 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 MICAL1Q8TDZ2 1067 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 TMEM120AQ9BXJ8 343 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 BCO2Q9BYV7 579 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 ADAM33Q9BZ11 813 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 FRMD8Q9BZ67 464 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 C10orf88Q9H8K7 445 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 MKS1Q9NXB0 559 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 STOML1Q9UBI4 398 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 HEY2Q9UBP5 337 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 MORF4L1Q9UBU8 362 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 CHMP2BQ9UQN3 213 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 WDR91A4D1P6 747 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 GSC2O15499 205 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 B4GALT4O60513 344 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 CD48P09326 243 aa13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
CLTCL1-210ENST00000617926 PROZP22891 400 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms