RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NDEL1Q9GZM8 345 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 ASNA1O43681 348 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 RHOBTB1O94844 696 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 KCNJ2P63252 427 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 RNF43Q68DV7 783 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 TRIM63Q969Q1 353 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 USE1Q9NZ43 259 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PCDHA3Q9Y5H8 950 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 NPHP4O75161 1426 aaPredicted RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 SPATA31A3Q5VYP0 1347 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 LINC00854A0A1B0GVQ3 168 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 UBDO15205 165 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 PHGDHO43175 533 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 MYL3P08590 195 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ATXN8OSP0DMR3 200 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 PECAM1P16284 738 aaPredicted RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 ATP6V1B2P21281 511 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 GLRBP48167 497 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 SLC1A6P48664 564 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 SEC23AQ15436 765 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 MAPRE1Q15691 268 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 STRA8Q7Z7C7 330 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ZNF34Q8IZ26 560 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 POU5F2Q8N7G0 328 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 TMC2Q8TDI7 906 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 SRPK1Q96SB4 655 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 CBWD1Q9BRT8 395 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 UBE2OQ9C0C9 1292 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 KCNH7Q9NS40 1196 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 EIF3LQ9Y262 564 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 MMP10P09238 476 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ELK3P41970 407 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 BAG6P46379 1132 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 MGAT5Q09328 741 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 PRKAA1Q13131 559 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 CLEC16AQ2KHT3 1053 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 GOLGA7BQ2TAP0 167 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ATF7IP2Q5U623 682 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 PTRHD1Q6GMV3 140 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 SLC47A2Q86VL8 602 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 TBC1D10AQ9BXI6 508 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 CHST12Q9NRB3 414 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 COMMD3-BMI1R4GMX3 469 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 DDX3XO00571 662 aaKnown RBP eCLIP11□□□□□ -0.65
CLTCL1-209ENST00000617103 CYTH3O43739 400 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 PGK2P07205 417 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 C4BPBP20851 252 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ATP6V1C1P21283 382 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 DRD4P21917 467 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ADRA1DP25100 572 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 SGO1Q5FBB7 561 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 AARS2Q5JTZ9 985 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 RDM1Q8NG50 284 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 FAM210AQ96ND0 272 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 MRPS26Q9BYN8 205 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 RPAP3Q9H6T3 665 aaPredicted RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 DIABLOQ9NR28 239 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 KCNK4Q9NYG8 393 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 RPL26L1Q9UNX3 145 aaKnown RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 VPS9D1Q9Y2B5 631 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 SMIM31A0A1B0GVY4 71 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 CAMTA2O94983 1202 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 RBP1P09455 135 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 CACNB2Q08289 660 aaPredicted RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 MPP3Q13368 585 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ITGA9Q13797 1035 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 GSTA3Q16772 222 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 N4BP2L1Q5TBK1 243 aaPredicted RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 CACHD1Q5VU97 1274 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 RSBN1Q5VWQ0 802 aaPredicted RBP11□□□□□ -0.65
CLTCL1-209ENST00000617103 EFHBQ8N7U6 833 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 LPAR1Q92633 364 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 ACTL7BQ9Y614 415 aa11□□□□□ -0.65
CLTCL1-209ENST00000617103 QRICH2Q9H0J4 1663 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 AK9Q5TCS8 1911 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 NR5A2O00482 541 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 ZNF862O60290 1169 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 CNOT3O75175 753 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 MAP3K6O95382 1288 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 MYBL2P10244 700 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 RARBP10826 455 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 CHRM3P20309 590 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 SSTR1P30872 391 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 TTKP33981 857 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 TRIM25Q14258 630 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 PKN1Q16512 942 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 ARMC4Q5T2S8 1044 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 ZNF720Q7Z2F6 126 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 OR8H2Q8N162 312 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 TTLL6Q8N841 843 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 OSCP1Q8WVF1 389 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 HPDLQ96IR7 371 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 COQ7Q99807 217 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 BDH2Q9BUT1 245 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 CEP44Q9C0F1 390 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 SESN1Q9Y6P5 492 aa10.99□□□□□ -0.65
CLTCL1-209ENST00000617103 TULP2O00295 520 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms