RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 SH3PXD2AQ5TCZ1 1133 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 FOXB2Q5VYV0 432 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 HOOK3Q86VS8 718 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 FITM2Q8N6M3 262 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 ART4Q93070 314 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 HEXIM2Q96MH2 286 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLITRK1Q96PX8 696 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 PLVAPQ9BX97 442 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 PPP1R12CQ9BZL4 782 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 RNPEPL1Q9HAU8 725 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 FGFR1OP2Q9NVK5 253 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 KLK14Q9P0G3 267 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 DNPEPQ9ULA0 475 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 H0Y3Z8 333 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 SMAPO00193 183 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 GPR32O75388 356 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 PSMA2P25787 234 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 DRG2P55039 364 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 OR52E8Q6IFG1 317 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 CATSPER4Q7RTX7 472 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 XYLT1Q86Y38 959 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 GBP7Q8N8V2 638 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 EPS8L3Q8TE67 593 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 TMEM176AQ96HP8 235 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 MRPL45Q9BRJ2 306 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 VCXQ9H320 206 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 PABPC3Q9H361 631 aaKnown RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 SYNCQ9H7C4 482 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 ETNK1Q9HBU6 452 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 FAM49BQ9NUQ9 324 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 COL1A2P08123 1366 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLC15A5A6NIM6 579 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 FOXO6A8MYZ6 492 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 TREHO43280 583 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 LRCH4O75427 683 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 SUN1O94901 812 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 ACSL3O95573 720 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 F2P00734 622 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 KRT3P12035 628 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 RGS7P49802 495 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 ITGA8P53708 1063 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 MYBPC3Q14896 1274 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 LRRC14Q15048 493 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 TRNP1Q6NT89 227 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 APBB1IPQ7Z5R6 666 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 SDCCAG8Q86SQ7 713 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 EXD1Q8NHP7 514 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 ADPGKQ9BRR6 497 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 ASB7Q9H672 318 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 GOLGA2P5Q9HBQ8 144 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 SNX9Q9Y5X1 595 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 SCN1AP35498 2009 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 TRIP11Q15643 1979 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 RGS16O15492 202 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF865P0CJ78 1059 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 TPBGLP0DKB5 382 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 CYP2C9P11712 490 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 MGARPQ8TDB4 240 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 STK32AQ8WU08 396 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 DNAJC9Q8WXX5 260 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 UTP4Q969X6 686 aaKnown RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 DTNBP1Q96EV8 351 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 RNF39Q9H2S5 420 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 CDC42EP4Q9H3Q1 356 aaKnown RBP11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 NEU2Q9Y3R4 380 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZSWIM8A7E2V4 1837 aa11.93□□□□□ -0.5
PCDHGA9-202ENST00000616887 A6NJR5 290 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 RIPK2O43353 540 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 PEX11AO75192 247 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 WFS1O76024 890 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 OAS1P00973 400 aaKnown RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 IGFBP6P24592 240 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MAN1A1P33908 653 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 ADCY8P40145 1251 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 GPD2P43304 727 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 NRLP54845 237 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLC25A11Q02978 314 aaKnown RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 CALCOCO2Q13137 446 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 IRF5Q13568 498 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 CCDC142Q17RM4 750 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MORN1Q5T089 497 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 ACBD5Q5T8D3 534 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 IQSEC1Q6DN90 963 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 SPOCD1Q6ZMY3 1216 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 SESTD1Q86VW0 696 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 TAB3Q8N5C8 712 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 DYDC1Q8WWB3 177 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 NDNQ99608 321 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms