RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LRRC8DQ7L1W4 858 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 NRDE2Q9H7Z3 1164 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 LRRC40Q9H9A6 602 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 ATAD3AQ9NVI7 634 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■■■■ 28.7
SPAST-203ENST00000615843 NR5A2O00482 541 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 PDK2Q15119 407 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 AGKQ53H12 422 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 TTC23LQ6PF05 361 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 RINLQ6ZS11 566 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 SH3RF1Q7Z6J0 888 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 STRA8Q7Z7C7 330 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 UNC45BQ8IWX7 931 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 LATS2Q9NRM7 1088 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 KCNH7Q9NS40 1196 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 SFMBT1Q9UHJ3 866 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 COMMD3-BMI1R4GMX3 469 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 CLOCKO15516 846 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 ATP6V1B2P21281 511 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 CHN2P52757 468 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 CACNB2Q08289 660 aaPredicted RBP19.47■□□□□ 0.71
SPAST-203ENST00000615843 SLC7A14Q8TBB6 771 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 NCKAP1LP55160 1127 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 POU4F1Q01851 419 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 DCAF4L1Q3SXM0 396 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 ARMCX4Q5H9R4 360 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 MARK2Q7KZI7 788 aaKnown RBP19.47■□□□□ 0.71
SPAST-203ENST00000615843 FAM210AQ96ND0 272 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 WRNIP1Q96S55 665 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 FAM237AA0A1B0GTK4 181 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 ASNA1O43681 348 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 MOXD1Q6UVY6 613 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 SIK3Q9Y2K2 1263 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 MYL3P08590 195 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 AMPD2Q01433 879 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 ITGA9Q13797 1035 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 BAATQ14032 418 aaPredicted RBP19.46■□□□□ 0.71
SPAST-203ENST00000615843 NEDD8Q15843 81 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 FBXO33Q7Z6M2 555 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 TAS1R2Q8TE23 839 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 DNAJC18Q9H819 358 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 PRPF4O43172 522 aaKnown RBP eCLIP19.46■□□□□ 0.71
SPAST-203ENST00000615843 DGKDQ16760 1214 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 SGO1Q5FBB7 561 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 RPAP3Q9H6T3 665 aaPredicted RBP19.46■□□□□ 0.71
SPAST-203ENST00000615843 NCKIPSDQ9NZQ3 722 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 SOAT2O75908 522 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 PROCP04070 461 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 ME2P23368 584 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 RPA3P35244 121 aaPredicted RBP19.46■□□□□ 0.71
SPAST-203ENST00000615843 RNF219Q5W0B1 726 aaPredicted RBP19.46■□□□□ 0.71
SPAST-203ENST00000615843 SH3TC2Q8TF17 1288 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 HES6Q96HZ4 224 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 ZNF333Q96JL9 665 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 C17orf75Q9HAS0 396 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 CYP4F12Q9HCS2 524 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 KCNK4Q9NYG8 393 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 TJP2Q9UDY2 1190 aa19.46■□□□□ 0.71
SPAST-203ENST00000615843 DLC1Q96QB1 1528 aa19.46■□□□□ 0.7
SPAST-203ENST00000615843 A0A087WXM4 84 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 PHGDHO43175 533 aaKnown RBP19.45■□□□□ 0.7
SPAST-203ENST00000615843 KRT36O76013 467 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 NR3C2P08235 984 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 BMP6P22004 513 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 PLIN5Q00G26 463 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 ZNF662Q6ZS27 426 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 ZNF720Q7Z2F6 126 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 FAM81AQ8TBF8 368 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 PLEKHA8Q96JA3 519 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 PARVBQ9HBI1 364 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 CHST12Q9NRB3 414 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 IARS2Q9NSE4 1012 aaKnown RBP19.45■□□□□ 0.7
SPAST-203ENST00000615843 RCCD1A6NED2 376 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 CFAP99D6REC4 459 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 TRIM24O15164 1050 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 UBDO15205 165 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 RHOBTB1O94844 696 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 DDX5P17844 614 aaKnown RBP19.45■□□□□ 0.7
SPAST-203ENST00000615843 RSBN1Q5VWQ0 802 aaPredicted RBP19.45■□□□□ 0.7
SPAST-203ENST00000615843 WDR59Q6PJI9 974 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 ISLR2Q6UXK2 745 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 MAGED4Q96JG8 741 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 DMAP1Q9NPF5 467 aaPredicted RBP19.45■□□□□ 0.7
SPAST-203ENST00000615843 SPDYE5A6NIY4 337 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 EFCAB14O75071 495 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 SPDYE7PQ495Y7 208 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 ATF7IP2Q5U623 682 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 RNF148Q8N7C7 305 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 COQ7Q99807 217 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 ZNF518BQ9C0D4 1074 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 LRMDAQ9H2I8 198 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 SLC30A1Q9Y6M5 507 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 CEMIPQ8WUJ3 1361 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 CAMTA2O94983 1202 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 GSNP06396 782 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 RTKN2Q8IZC4 609 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 MCOLN2Q8IZK6 566 aa19.45■□□□□ 0.7
SPAST-203ENST00000615843 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 ANXA9O76027 345 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 IREB2P48200 963 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms