RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 RGL4Q8IZJ4 473 aa19.33■□□□□ 0.68
GABPB1-212ENST00000615671 ZNF473Q8WTR7 871 aaKnown RBP19.33■□□□□ 0.68
GABPB1-212ENST00000615671 USP20Q9Y2K6 914 aa19.33■□□□□ 0.68
GABPB1-212ENST00000615671 ABCA8O94911 1581 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 NBNO60934 754 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 CXCL8P10145 99 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 MDH1P40925 334 aaKnown RBP19.32■□□□□ 0.68
GABPB1-212ENST00000615671 BACE1P56817 501 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 FAM171A1Q5VUB5 890 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 PCSK9Q8NBP7 692 aaKnown RBP19.32■□□□□ 0.68
GABPB1-212ENST00000615671 PLA2G12BQ9BX93 195 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 FEN1P39748 380 aaKnown RBP19.32■□□□□ 0.68
GABPB1-212ENST00000615671 TRIM32Q13049 653 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ZNF484Q5JVG2 852 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 TRAPPC11Q7Z392 1133 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 DNAAF5Q86Y56 855 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 MMGT1Q8N4V1 131 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 KCNB2Q92953 911 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 SENP6Q9GZR1 1112 aaPredicted RBP19.32■□□□□ 0.68
GABPB1-212ENST00000615671 PDS5AQ29RF7 1337 aaKnown RBP19.32■□□□□ 0.68
GABPB1-212ENST00000615671 SPATA31A6Q5VVP1 1343 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 CLK1P49759 484 aaKnown RBP19.32■□□□□ 0.68
GABPB1-212ENST00000615671 FAR2Q96K12 515 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ANKEF1Q9NU02 776 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 MRNIPQ6NTE8 343 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 FOXR1Q6PIV2 292 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 TADA1Q96BN2 335 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ACOX2Q99424 681 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 RFX7Q2KHR2 1363 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 MGAT4DA6NG13 374 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 NFIBO00712 420 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ZNF682O95780 498 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ATP6V1C1P21283 382 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ANTXR2P58335 489 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 AGAP9Q5VTM2 703 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 EMC1Q8N766 993 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 CSGALNACT1Q8TDX6 532 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 SCN3BQ9NY72 215 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 LNPEPQ9UIQ6 1025 aa19.32■□□□□ 0.68
GABPB1-212ENST00000615671 ERI2A8K979 691 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 COILP38432 576 aaPredicted RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 TKTL1P51854 596 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 YWHAZP63104 245 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 RUNX1T1Q06455 604 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 IRAK1BP1Q5VVH5 260 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 CATSPER1Q8NEC5 780 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 MDM1Q8TC05 714 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 IMPAD1Q9NX62 359 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 PDZK1P1A8MUH7 402 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 CCNT2O60583 730 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 MT-CO1P00395 513 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 YWHAQP27348 245 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 MAGEA9P43362 315 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 GEMIN4P57678 1058 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 PLD1Q13393 1074 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 PTGISQ16647 500 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 DENND1BQ6P3S1 775 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 TPGS1Q6ZTW0 290 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 ZNF333Q96JL9 665 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 ALKQ9UM73 1620 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 CYP2C8P10632 490 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 MSH3P20585 1137 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 TRIP10Q15642 601 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 FBXO33Q7Z6M2 555 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 ERO1BQ86YB8 467 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 MTFMTQ96DP5 389 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 EMILIN2Q9BXX0 1053 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 GLIS2Q9BZE0 524 aaPredicted RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 GTF2E2P29084 291 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 DSG3P32926 999 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 SFSWAPQ12872 951 aaKnown RBP19.31■□□□□ 0.68
GABPB1-212ENST00000615671 ADAM32Q8TC27 787 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 RBBP8Q99708 897 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 ZNF521Q96K83 1311 aa19.31■□□□□ 0.68
GABPB1-212ENST00000615671 A0A1B0GTH6 734 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 USP39Q53GS9 565 aaKnown RBP19.3■□□□□ 0.68
GABPB1-212ENST00000615671 ZNF280DQ6N043 979 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 TNIP2Q8NFZ5 429 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 MTA3Q9BTC8 594 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 TECPR2O15040 1411 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 IFRD1O00458 451 aaPredicted RBP19.3■□□□□ 0.68
GABPB1-212ENST00000615671 NR5A2O00482 541 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 LUZP2Q86TE4 346 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 CBWD1Q9BRT8 395 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 SPATA31E1Q6ZUB1 1445 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 CSHL1Q14406 222 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 BNIPLQ7Z465 357 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 PALB2Q86YC2 1186 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 TRAPPC12Q8WVT3 735 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.3■□□□□ 0.688e-6■■■■□ 19.7
GABPB1-212ENST00000615671 RHBGQ9H310 441 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 PDGFCQ9NRA1 345 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 PCDHGA4Q9Y5G9 962 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 TPH1P17752 444 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 NOL9Q5SY16 702 aaKnown RBP19.3■□□□□ 0.68
GABPB1-212ENST00000615671 SLC30A10Q6XR72 485 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 PRUNE1Q86TP1 453 aa19.3■□□□□ 0.68
GABPB1-212ENST00000615671 SEMA4DQ92854 862 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms