RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CLK2P49760 499 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC6A3Q01959 620 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SYCP2LQ5T4T6 812 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 C12orf56Q8IXR9 622 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SNX19Q92543 992 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 EDEM1Q92611 657 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 CENPKQ9BS16 269 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 PACSIN1Q9BY11 444 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 AVENQ9NQS1 362 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 EPS15L1Q9UBC2 864 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF112Q9UJU3 913 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SPRP35270 261 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF135P52742 658 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SMAD1Q15797 465 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ERMARDQ5T6L9 678 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 EEF1DP3Q658K8 133 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 RETSATQ6NUM9 610 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SPOCD1Q6ZMY3 1216 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 NUDCD3Q8IVD9 361 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF557Q8N988 423 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 PDZD8Q8NEN9 1154 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC13A1Q9BZW2 595 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SMYD3Q9H7B4 428 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ZCCHC17Q9NP64 241 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 C20orf96Q9NUD7 363 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 G3BP2Q9UN86 482 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 SCN11AQ9UI33 1791 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 CRYBG1Q9Y4K1 1723 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 B4GALT5O43286 388 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 PMPCBO75439 489 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ATXN8OSP0DMR3 200 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 RGS4P49798 205 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ART3Q13508 389 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 ACAP1Q15027 740 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 CNGA2Q16280 664 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 KIF19Q2TAC6 998 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 PLA2G4CQ9UP65 541 aa9.8□□□□□ -0.84
CLTCL1-208ENST00000615606 C2orf81A6NN90 581 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 PEX10O60683 326 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 MYO1DO94832 1006 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 LTFP02788 710 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 ADH1AP07327 375 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 GJB1P08034 283 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 KCNJ1P48048 391 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF200P98182 395 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 FSCBQ5H9T9 825 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 PTRHD1Q6GMV3 140 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 LRRC8DQ7L1W4 858 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 KIRREL3Q8IZU9 778 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 LPPQ93052 612 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 POPDC2Q9HBU9 364 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CHMP2BQ9UQN3 213 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 APOBEC2Q9Y235 224 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 IGLV3-22A0A075B6J6 115 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 GSTA4O15217 222 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 RAD51CO43502 376 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CCDC130P13994 396 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 RHOAP61586 193 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 PPP2R2AP63151 447 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 FSTL1Q12841 308 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CES5AQ6NT32 575 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 LRRC55Q6ZSA7 311 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 MMGT1Q8N4V1 131 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 ATXN7L3BQ96GX2 97 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 HSFY1Q96LI6 401 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 XPO6Q96QU8 1125 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 HAUS8Q9BT25 410 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 SCUBE2Q9NQ36 999 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TXLNGQ9NUQ3 528 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CPSF2Q9P2I0 782 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CRLS1Q9UJA2 301 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TMEM247A6NEH6 219 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 LRRC10BA6NIK2 292 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TXNDC9O14530 226 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TLL1O43897 1013 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 KDM1AO60341 852 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CDH16O75309 829 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 GFAPP14136 432 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 PRLRP16471 622 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 GGCXP38435 758 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 ITGA8P53708 1063 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TUSC3Q13454 348 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 USP10Q14694 798 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC24A5Q71RS6 500 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CCNJLQ8IV13 435 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TTC30BQ8N4P2 665 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 LZTR1Q8N653 840 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 STAMBPL1Q96FJ0 436 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 CIPCQ9C0C6 399 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 ABCC13Q9NSE7 274 aa9.79□□□□□ -0.84
CLTCL1-208ENST00000615606 TREHO43280 583 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 LAG3P18627 525 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TGM2P21980 687 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TNFSF9P41273 254 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 LIG3P49916 1009 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms