RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KRCC1Q9NPI7 259 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMCO1Q9UM00 188 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TRAF3IP3Q9Y228 551 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 A0A0A6YYK5 440 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZSCAN5CA6NGD5 496 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 SLC2A4P14672 509 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 NR2C2P49116 596 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 MYL6P60660 151 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 CAMK2GQ13555 558 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZC3H18Q86VM9 953 aaKnown RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 LRRC52Q8N7C0 313 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 CXorf40AQ8TE69 158 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 CISHQ9NSE2 258 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 VPS51Q9UID3 782 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 ST3GAL5Q9UNP4 418 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 FHOD1Q9Y613 1164 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 ABHD14A-ACY1A0A1B0GW23 586 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 PSMD10O75832 226 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 ATP5HO75947 161 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 NFATC1O95644 943 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 GFAPP14136 432 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 CASP1P29466 404 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 CCL23P55773 120 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMPRSS15P98073 1019 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 POU5F1BQ06416 359 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 RASAL3Q86YV0 1011 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 PPIL6Q8IXY8 311 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 RNF217Q8TC41 542 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 VAT1Q99536 393 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TMEM175Q9BSA9 504 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 KCNMB3Q9NPA1 279 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 CD274Q9NZQ7 290 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TARSL2A2RTX5 802 aaKnown RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 HOXB8P17481 243 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 MSH3P20585 1137 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 GALCP54803 685 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 PRUNE1Q86TP1 453 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZBED8Q8IZ13 594 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 EXD1Q8NHP7 514 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 SPPL2BQ8TCT7 592 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 SENP8Q96LD8 212 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 TTPALQ9BTX7 342 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 PDGFDQ9GZP0 370 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 FIS1Q9Y3D6 152 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 RAD54BQ9Y620 910 aa10.1□□□□□ -0.79
TNFRSF9-204ENST00000615230 A0A088AWK7 358 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 A0A1B0GUA9 196 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 A0A1W2PQ67 120 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 RECQL4O94761 1208 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 CCL5P13501 91 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZNF10P21506 573 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 GABPB1Q06547 395 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ZDHHC20Q5W0Z9 365 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 PPP2R2DQ66LE6 453 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 USP45Q70EL2 814 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 SZRD1Q7Z422 152 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 TNS4Q8IZW8 715 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 MYO1HQ8N1T3 1032 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 PPM1NQ8N819 430 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 USP33Q8TEY7 942 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 LRRC40Q9H9A6 602 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 COG4Q9H9E3 785 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 GPRC5CQ9NQ84 441 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ATRNL1Q5VV63 1379 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 SYCE1LA8MT33 242 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 RAMP2O60895 175 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 RHOBTB1O94844 696 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 DDX6P26196 483 aaKnown RBP eCLIP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ENPEPQ07075 957 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 PKN1Q16512 942 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 FIGNQ5HY92 759 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ERMARDQ5T6L9 678 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 EPM2AIP1Q7L775 607 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 MIB1Q86YT6 1006 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 MAGEB10Q96LZ2 347 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 GPR20Q99678 358 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 POPDC2Q9HBU9 364 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 NMRK2Q9NPI5 230 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 LATS2Q9NRM7 1088 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 C5orf58C9J3I9 102 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 RAP1GDS1P52306 607 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 NCKAP1LP55160 1127 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 KRT72Q14CN4 511 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 TEAD4Q15561 434 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 IPMKQ8NFU5 416 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 REPS1Q96D71 796 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 OMDQ99983 421 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 C2orf49Q9BVC5 232 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 PRKD2Q9BZL6 878 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ADGRA2Q96PE1 1338 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms