RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CYTH4Q9UIA0 394 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 TFR2Q9UP52 801 aa12.06□□□□□ -0.48
SLIRP-212ENST00000613856 EP300Q09472 2414 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 MYBPHLA2RUH7 354 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 XPO1O14980 1071 aaKnown RBP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 KIF5CO60282 957 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 ABL1P00519 1130 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 NPR3P17342 541 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 ABCB4P21439 1286 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 ADORA2BP29275 332 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 PLA2G4AP47712 749 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 GABRB2P47870 512 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 SMARCB1Q12824 385 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 PTPN14Q15678 1187 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 IFI16Q16666 785 aaKnown RBP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 PTPN20Q4JDL3 420 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 CTXN3Q4LDR2 81 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 RTP2Q5QGT7 225 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 LIN9Q5TKA1 542 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 C4orf50Q6ZRC1 276 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 MMS22LQ6ZRQ5 1243 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 PAQR9Q6ZVX9 377 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 DDX53Q86TM3 631 aaKnown RBP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 ERICH1Q86X53 443 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 DNAAF5Q86Y56 855 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 FLCNQ8NFG4 579 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 IPO4Q8TEX9 1081 aaKnown RBP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 SLC35F5Q8WV83 523 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 ARHGEF26Q96DR7 871 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 SMARCD1Q96GM5 515 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 FUBP3Q96I24 572 aaKnown RBP eCLIP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 CDCA3Q99618 268 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-212ENST00000613856 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 B3GNT5Q9BYG0 378 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 UVRAGQ9P2Y5 699 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 MTRRQ9UBK8 725 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 LIMD1Q9UGP4 676 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 BACE2Q9Y5Z0 518 aa12.05□□□□□ -0.48
SLIRP-212ENST00000613856 ZNF292O60281 2723 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 TCRBV5S1A1TA0A578 114 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 FAM200BP0CF97 657 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 GLUD2P49448 558 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 SLC8A3P57103 927 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 SNX16P57768 344 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 ETF1P62495 437 aaKnown RBP12.04□□□□□ -0.48
SLIRP-212ENST00000613856 DSG1Q02413 1049 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 PDE4CQ08493 712 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 NFE2Q16621 373 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CFAP221Q4G0U5 840 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 RARS2Q5T160 578 aaKnown RBP12.04□□□□□ -0.48
SLIRP-212ENST00000613856 PLEKHA7Q6IQ23 1121 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CLEC20AQ6ZU45 233 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CEP57Q86XR8 500 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 UBALD2Q8IYN6 164 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 C3orf20Q8ND61 904 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 AUTS2Q8WXX7 1259 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 HSFY1Q96LI6 401 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 C16orf45Q96MC5 204 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-212ENST00000613856 TMEM209Q96SK2 561 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 MED10Q9BTT4 135 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 UBXN6Q9BZV1 441 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CSNK1G1Q9HCP0 422 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 PNPLA8Q9NP80 782 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 KRT82Q9NSB4 513 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 CNOT8Q9UFF9 292 aaKnown RBP12.04□□□□□ -0.48
SLIRP-212ENST00000613856 SALL4Q9UJQ4 1053 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 SCINQ9Y6U3 715 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 DUSP10Q9Y6W6 482 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 MYO16Q9Y6X6 1858 aa12.04□□□□□ -0.48
SLIRP-212ENST00000613856 GREB1Q4ZG55 1949 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 COL4A3Q01955 1670 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 MACROD2A1Z1Q3 448 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 CLDN5O00501 218 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 CLASP2O75122 1294 aaKnown RBP12.03□□□□□ -0.48
SLIRP-212ENST00000613856 AP1G2O75843 785 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 RRM1P23921 792 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 SCNN1AP37088 669 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 ACADSBP45954 432 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 NUBP1P53384 320 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 CREMQ03060 361 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 ZNF268Q14587 947 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-212ENST00000613856 PSMD5Q16401 504 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 SLC8B1Q6J4K2 584 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 PMF1Q6P1K2 205 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 TMEM110Q86TL2 294 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 LRRTM3Q86VH5 581 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 XYLT1Q86Y38 959 aa12.03□□□□□ -0.48
SLIRP-212ENST00000613856 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms