RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PTP4A2Q12974 167 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 MTMR3Q13615 1198 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 PM20D1Q6GTS8 502 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 OR6B2Q6IFH4 312 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 ANKRD54Q6NXT1 300 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 TOGARAM2Q6ZUX3 1019 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 H2AFVQ71UI9 128 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 TXLNBQ8N3L3 684 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 IRGQQ8WZA9 623 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 ZNF830Q96NB3 372 aaPredicted RBP15.46■□□□□ 0.07
CD48-203ENST00000613788 SLITRK1Q96PX8 696 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 ULBP1Q9BZM6 244 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 PIDD1Q9HB75 910 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 MTMR10Q9NXD2 777 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 INTUQ9ULD6 942 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 SCML2Q9UQR0 700 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 PCDHA13Q9Y5I0 950 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 PLXNA3P51805 1871 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 FAM92AA1XBS5 289 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 LINC01565O15544 149 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 PAPSS1O43252 624 aaPredicted RBP15.45■□□□□ 0.06
CD48-203ENST00000613788 PAPLNO95428 1278 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 GLP2RO95838 553 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 USP17L7P0C7H9 530 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
CD48-203ENST00000613788 ABCB4P21439 1286 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 PPP3CCP48454 512 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 DAOAP59103 153 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 USP46P62068 366 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 GPC5P78333 572 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 MRPS5P82675 430 aaKnown RBP15.45■□□□□ 0.06
CD48-203ENST00000613788 SLC6A3Q01959 620 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 CTC1Q2NKJ3 1217 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 PABPC1LQ4VXU2 614 aaKnown RBP15.45■□□□□ 0.06
CD48-203ENST00000613788 C2CD6Q53TS8 623 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 EFHC1Q5JVL4 640 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 CYP4A22Q5TCH4 519 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 MON1AQ86VX9 555 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 XYLT1Q86Y38 959 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 ARHGAP18Q8N392 663 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 STKLD1Q8NE28 680 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 PDZD8Q8NEN9 1154 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 CTNNBL1Q8WYA6 563 aaPredicted RBP15.45■□□□□ 0.06
CD48-203ENST00000613788 OVCA2Q8WZ82 227 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 FBXO32Q969P5 355 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
CD48-203ENST00000613788 GUCD1Q96NT3 240 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 KCNF1Q9H3M0 494 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 CLDND1Q9NY35 253 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 TJP2Q9UDY2 1190 aa15.45■□□□□ 0.06
CD48-203ENST00000613788 FGF19O95750 216 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 SCNN1AP37088 669 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 GSCP56915 257 aaPredicted RBP15.44■□□□□ 0.06
CD48-203ENST00000613788 TAF10Q12962 218 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 COL19A1Q14993 1142 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 TMC5Q6UXY8 1006 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 EP400NLQ6ZTU2 488 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 FAM183BPQ6ZVS7 135 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 DNAAF5Q86Y56 855 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 C12orf76Q8N812 135 aaPredicted RBP15.44■□□□□ 0.06
CD48-203ENST00000613788 LEMD2Q8NC56 503 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 SMG7Q92540 1137 aaKnown RBP15.44■□□□□ 0.06
CD48-203ENST00000613788 GOLGA1Q92805 767 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 ZNF653Q96CK0 615 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 MCRS1Q96EZ8 462 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 CORO1BQ9BR76 489 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 TRIM62Q9BVG3 475 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 ASAH2Q9NR71 780 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 PARVAQ9NVD7 372 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 CNOT8Q9UFF9 292 aaKnown RBP15.44■□□□□ 0.06
CD48-203ENST00000613788 ATG2AQ2TAZ0 1938 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 MTCL1Q9Y4B5 1905 aaKnown RBP15.44■□□□□ 0.06
CD48-203ENST00000613788 MYH10P35580 1976 aa15.44■□□□□ 0.06
CD48-203ENST00000613788 GLI1P08151 1106 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 TMEM253P0C7T8 217 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 RRM1P23921 792 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 PSEN1P49768 467 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 ITIH3Q06033 890 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 RARS2Q5T160 578 aaKnown RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 DNAJC24Q6P3W2 148 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 OLFML1Q6UWY5 402 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 KIAA1328Q86T90 577 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 C3orf20Q8ND61 904 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 ACRBPQ8NEB7 543 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 ZNF707Q96C28 371 aaPredicted RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 TRIM44Q96DX7 344 aaPredicted RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 SELENOOQ9BVL4 669 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 THAP2Q9H0W7 228 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 MRPL47Q9HD33 250 aaKnown RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 AVENQ9NQS1 362 aaPredicted RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 TLR8Q9NR97 1041 aaKnown RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 ASNSD1Q9NWL6 643 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 TRPM5Q9NZQ8 1165 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 CHORDC1Q9UHD1 332 aaPredicted RBP15.43■□□□□ 0.06
CD48-203ENST00000613788 ADGRG1Q9Y653 693 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 SCINQ9Y6U3 715 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 NCANO14594 1321 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 GOLGA8SH3BPF8 625 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 CCDC175P0C221 793 aa15.43■□□□□ 0.06
CD48-203ENST00000613788 CDC25CP30307 473 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms