RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 TAS1R2Q8TE23 839 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 RMDN1Q96DB5 314 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 FBXO44Q9H4M3 255 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 MMRN2Q9H8L6 949 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.39■□□□□ 0.53
PRKN-209ENST00000612485 CFAP97Q9P2B7 532 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 HMGXB4Q9UGU5 601 aa18.39■□□□□ 0.53
PRKN-209ENST00000612485 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
PRKN-209ENST00000612485 FAM92AA1XBS5 289 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 CETN3O15182 167 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 RETP07949 1114 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 FAM200BP0CF97 657 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 MAP3K7CLP57077 242 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 PNOCQ13519 176 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 PUM1Q14671 1186 aaKnown RBP eCLIP18.38■□□□□ 0.53
PRKN-209ENST00000612485 KRT39Q6A163 491 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 CEP68Q76N32 757 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.38■□□□□ 0.53
PRKN-209ENST00000612485 SMYD4Q8IYR2 804 aaPredicted RBP18.38■□□□□ 0.53
PRKN-209ENST00000612485 CAMKK1Q8N5S9 505 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 C12orf29Q8N999 325 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 ZMIZ2Q8NF64 920 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 RPLP0P6Q8NHW5 317 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 ACDQ96AP0 544 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 SMOQ99835 787 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 NIF3L1Q9GZT8 377 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 APOBEC3GQ9HC16 384 aaKnown RBP18.38■□□□□ 0.53
PRKN-209ENST00000612485 FAM49BQ9NUQ9 324 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 TBC1D14Q9P2M4 693 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 USP18Q9UMW8 372 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 DCHS1Q96JQ0 3298 aa18.38■□□□□ 0.53
PRKN-209ENST00000612485 DMXL1Q9Y485 3027 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 COCHO43405 550 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 STX10O60499 249 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 LRP3O75074 770 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 SMC2O95347 1197 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 ZDHHC11BP0C7U3 371 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
PRKN-209ENST00000612485 SDHBP21912 280 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 ADORA2BP29275 332 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 MCCD1P59942 119 aaPredicted RBP18.37■□□□□ 0.53
PRKN-209ENST00000612485 LMNB2Q03252 620 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 SRSF5Q13243 272 aaKnown RBP18.37■□□□□ 0.53
PRKN-209ENST00000612485 ADGRG2Q8IZP9 1017 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 GSDMAQ96QA5 445 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 HNRNPABQ99729 332 aaKnown RBP18.37■□□□□ 0.53
PRKN-209ENST00000612485 TSG101Q99816 390 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 NACA2Q9H009 215 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 GMIPQ9P107 970 aa18.37■□□□□ 0.53
PRKN-209ENST00000612485 HOOK1Q9UJC3 728 aaKnown RBP18.37■□□□□ 0.53
PRKN-209ENST00000612485 E2F8A0AVK6 867 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 PRR5-ARHGAP8B1AHC4 643 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 BEST1O76090 585 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 ADH1CP00326 375 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 CYP17A1P05093 508 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 OPRD1P41143 372 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 MXI1P50539 228 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 ARHGAP8P85298 464 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 DHCR24Q15392 516 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 COBLL1Q53SF7 1204 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 ZNF658Q5TYW1 1059 aaPredicted RBP18.36■□□□□ 0.53
PRKN-209ENST00000612485 SYT13Q7L8C5 426 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 TTC39CQ8N584 583 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 EZH1Q92800 747 aaPredicted RBP18.36■□□□□ 0.53
PRKN-209ENST00000612485 OTUB2Q96DC9 234 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 CYFIP2Q96F07 1278 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 FAXDC2Q96IV6 333 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 TWNKQ96RR1 684 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 GTPBP4Q9BZE4 634 aaKnown RBP18.36■□□□□ 0.53
PRKN-209ENST00000612485 TLR8Q9NR97 1041 aaKnown RBP18.36■□□□□ 0.53
PRKN-209ENST00000612485 SH3BP1Q9Y3L3 701 aa18.36■□□□□ 0.53
PRKN-209ENST00000612485 CILPO75339 1184 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 CD58P19256 250 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 TGM1P22735 817 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 HOXC13P31276 330 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 PRCPP42785 496 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 PXNP49023 591 aaPredicted RBP18.35■□□□□ 0.53
PRKN-209ENST00000612485 SPEM2Q0P670 501 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 RSPO4Q2I0M5 234 aaPredicted RBP18.35■□□□□ 0.53
PRKN-209ENST00000612485 CLEC20AQ6ZU45 233 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 DGLUCYQ7Z3D6 616 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 ENGASEQ8NFI3 743 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 GAB3Q8WWW8 586 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 SMARCE1Q969G3 411 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 TIGD1Q96MW7 591 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 CCSER2Q9H7U1 834 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 PNPLA8Q9NP80 782 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 PARD6AQ9NPB6 346 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 DLL3Q9NYJ7 618 aa18.35■□□□□ 0.53
PRKN-209ENST00000612485 SCAMP3O14828 347 aaKnown RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 SLC16A3O15427 465 aaKnown RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 TLR5O60602 858 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 RPP40O75818 363 aaKnown RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 CCDC192P0DO97 292 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 EIF2DP41214 584 aaKnown RBP18.34■□□□□ 0.53
PRKN-209ENST00000612485 DMC1Q14565 340 aa18.34■□□□□ 0.53
PRKN-209ENST00000612485 GAB4Q2WGN9 574 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms