RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 DSG1Q02413 1049 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 KBTBD12Q3ZCT8 623 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 GJC2Q5T442 439 aaPredicted RBP3.94□□□□□ -1.78
RNF38-210ENST00000611646 DUPD1Q68J44 220 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 STRA8Q7Z7C7 330 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 APOBEC3FQ8IUX4 373 aaKnown RBP3.94□□□□□ -1.78
RNF38-210ENST00000611646 C4orf19Q8IY42 314 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 IQCKQ8N0W5 287 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 MIER2Q8N344 545 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 BBS5Q8N3I7 341 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 ATPAF2Q8N5M1 289 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 SCFD2Q8WU76 684 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 GPRASP2Q96D09 838 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 WNK4Q96J92 1243 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 CATSPER2Q96P56 530 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 SRPK1Q96SB4 655 aaKnown RBP3.94□□□□□ -1.78
RNF38-210ENST00000611646 ARHGEF38Q9NXL2 777 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 SNTG2Q9NY99 539 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 TSPAN16Q9UKR8 245 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
RNF38-210ENST00000611646 RUVBL2Q9Y230 463 aaKnown RBP3.94□□□□□ -1.78
RNF38-210ENST00000611646 E5RJQ4 531 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 DNM1LO00429 736 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 DDX3YO15523 660 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 PEX1O43933 1283 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SNX3O60493 162 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 MICAL2O94851 1124 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 F7P08709 466 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 FGFR3P22607 806 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 CYP2F1P24903 491 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 MGAT1P26572 445 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 MIPP30301 263 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 NAMPTP43490 491 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 TSPY1Q01534 308 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ITGA9Q13797 1035 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 LBRQ14739 615 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 C6orf10Q5SRN2 563 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 N4BP2L1Q5TBK1 243 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 ALYREFQ86V81 257 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 DEFB107AQ8IZN7 70 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SCG3Q8WXD2 468 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 TMEM176AQ96HP8 235 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 KREMEN1Q96MU8 473 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 OSMRQ99650 979 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 MAN1C1Q9NR34 630 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 WDR35Q9P2L0 1181 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 AP4E1Q9UPM8 1137 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 CDYLQ9Y232 598 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 UMODL1Q5DID0 1318 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 AGRPO00253 132 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 PFDN6O15212 129 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 B4GALT5O43286 388 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 HNRNPCP07910 306 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNF38-210ENST00000611646 ERVK-10P10266 1014 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 CYP2C9P11712 490 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ZFXP17010 805 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 MLH1P40692 756 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 PRKCIP41743 596 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 PLK1P53350 603 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SLC25A3Q00325 362 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 PTPN11Q06124 597 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 UBAP2LQ14157 1087 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 POU6F1Q14863 301 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 IMPG1Q17R60 797 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 DNAL1Q4LDG9 190 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SNX30Q5VWJ9 437 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 IER5Q5VY09 327 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ITPRIPL1Q6GPH6 555 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 FAM117BQ6P1L5 589 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 MPZL3Q6UWV2 235 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 AMIGO3Q86WK7 504 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 RNF168Q8IYW5 571 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 THEM5Q8N1Q8 247 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 C12orf29Q8N999 325 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 COLGALT1Q8NBJ5 622 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 PPHLN1Q8NEY8 458 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 SPDYE1Q8NFV5 336 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 PHF21BQ96EK2 531 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 TNIP3Q96KP6 325 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 EPAS1Q99814 870 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SEMA6AQ9H2E6 1030 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SETD4Q9NVD3 440 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 THEGQ9P2T0 379 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SLC17A7Q9P2U7 560 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 MID2Q9UJV3 735 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 VAV3Q9UKW4 847 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 C15orf41Q9Y2V0 281 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ORC6Q9Y5N6 252 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SYCE1LA8MT33 242 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 LACTBL1A8MY62 500 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 SUPT3HB4E1H0 165 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ANGPT2O15123 496 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 LYPLA1O75608 230 aaPredicted RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 KRT36O76013 467 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 GARTP22102 1010 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 PTPN4P29074 926 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 NRLP54845 237 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ZNF235Q14590 738 aa3.93□□□□□ -1.78
RNF38-210ENST00000611646 ZC3H12AQ5D1E8 599 aaKnown RBP3.93□□□□□ -1.78
RNF38-210ENST00000611646 BTNL9Q6UXG8 535 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms