RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SDHBP21912 280 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 TGM1P22735 817 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 PRCPP42785 496 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 CDH8P55286 799 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 CLDN10P78369 228 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 LMNB2Q03252 620 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 SPEM2Q0P670 501 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 NR1H3Q13133 447 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 PAK1Q13153 545 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 STIM1Q13586 685 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 NCOA4Q13772 614 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 EML3Q32P44 896 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF667Q5HYK9 610 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 WDR5BQ86VZ2 330 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 TMEM174Q8WUU8 243 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 B3GNT5Q9BYG0 378 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 LINC00597Q9H2U6 94 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 KCTD10Q9H3F6 313 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 SMYD3Q9H7B4 428 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 PARD6AQ9NPB6 346 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 SLC8A2Q9UPR5 921 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 PRR5-ARHGAP8B1AHC4 643 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 CLDN5O00501 218 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 PDXKO00764 312 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 CACNA2D1P54289 1103 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 ARHGAP8P85298 464 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 TAF10Q12962 218 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 NAIF1Q69YI7 327 aaPredicted RBP23.08■■□□□ 1.29
CBWD3-207ENST00000611426 CEP68Q76N32 757 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 CD101Q93033 1021 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 NFE2L3Q9Y4A8 694 aa23.08■■□□□ 1.29
CBWD3-207ENST00000611426 LEFTY2O00292 366 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 PSMA7O14818 248 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 NR3C1P04150 777 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 RAP1GAPP47736 663 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 DLG4P78352 724 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 IFRD2Q12894 506 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-207ENST00000611426 FBXO43Q4G163 708 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 SMYD4Q8IYR2 804 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-207ENST00000611426 GUF1Q8N442 669 aaKnown RBP23.07■■□□□ 1.28
CBWD3-207ENST00000611426 SLITRK1Q96PX8 696 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 RNF38Q9H0F5 515 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 TMEM30AQ9NV96 361 aa23.07■■□□□ 1.28
CBWD3-207ENST00000611426 HELZP42694 1942 aaKnown RBP23.06■■□□□ 1.28
CBWD3-207ENST00000611426 VNN1O95497 513 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 NFATC1O95644 943 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 PXNP49023 591 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-207ENST00000611426 ZXDBP98169 803 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 SGSM1Q2NKQ1 1148 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 CDKAL1Q5VV42 579 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 SCARA5Q6ZMJ2 495 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 NUP93Q8N1F7 819 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 ELMO3Q96BJ8 720 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 TNIP3Q96KP6 325 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 MED10Q9BTT4 135 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 TRIM5Q9C035 493 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 FANCLQ9NW38 375 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 ATP8B3O60423 1300 aa23.06■■□□□ 1.28
CBWD3-207ENST00000611426 CALUO43852 315 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-207ENST00000611426 P4HA1P13674 534 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 YWHAQP27348 245 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 SLC7A9P82251 487 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 CEP135Q66GS9 1140 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 NELFBQ8WX92 580 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 KCNK16Q96T55 309 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 FRMD4BQ9Y2L6 1034 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 CPQQ9Y646 472 aa23.05■■□□□ 1.28
CBWD3-207ENST00000611426 LRP3O75074 770 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 RTN3O95197 1032 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-207ENST00000611426 KIF20AO95235 890 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 CAMKK1Q8N5S9 505 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 FAM160A2Q8N612 972 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-207ENST00000611426 RPLP0P6Q8NHW5 317 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 TMC2Q8TDI7 906 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 SMPD4Q9NXE4 827 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 CDV3Q9UKY7 258 aaKnown RBP23.04■■□□□ 1.28
CBWD3-207ENST00000611426 CTNND2Q9UQB3 1225 aa23.04■■□□□ 1.28
CBWD3-207ENST00000611426 CCDC163A0A0D9SF12 145 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 OLFM2O95897 454 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 OAS1P00973 400 aaKnown RBP23.03■■□□□ 1.28
CBWD3-207ENST00000611426 ZACNQ401N2 412 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 KLHL10Q6JEL2 608 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 TTI2Q6NXR4 508 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 SV2AQ7L0J3 742 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 FILIP1Q7Z7B0 1213 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 FAM35AQ86V20 835 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 PDZD8Q8NEN9 1154 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 FBXO32Q969P5 355 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 SDCBP2Q9H190 292 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 SEMA4GQ9NTN9 838 aa23.03■■□□□ 1.28
CBWD3-207ENST00000611426 POLR3BQ9NW08 1133 aaPredicted RBP23.03■■□□□ 1.28
CBWD3-207ENST00000611426 BICDL2A1A5D9 508 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 RPP40O75818 363 aaKnown RBP23.02■■□□□ 1.28
CBWD3-207ENST00000611426 ATXN1P54253 815 aaKnown RBP23.02■■□□□ 1.28
CBWD3-207ENST00000611426 FANCCQ00597 558 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 PAQR9Q6ZVX9 377 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 ACOT1Q86TX2 421 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 KIAA1958Q8N8K9 716 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 GAB3Q8WWW8 586 aa23.02■■□□□ 1.28
CBWD3-207ENST00000611426 TAF4BQ92750 862 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms