RNA–Protein interactions for RNA: ENST00000610293.1

U1.23-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.23-201ENST00000610293 NKX1-2Q9UD57 310 aaPredicted RBP3.38□□□□□ -1.87
U1.23-201ENST00000610293 GTF2IRD1Q9UHL9 959 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 BAIAP2L1Q9UHR4 511 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 KCNH4Q9UQ05 1017 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 CHMP2BQ9UQN3 213 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 ZNF148Q9UQR1 794 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 USP3Q9Y6I4 520 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 NUP214P35658 2090 aaPredicted RBP3.38□□□□□ -1.87
U1.23-201ENST00000610293 COL1A2P08123 1366 aa3.38□□□□□ -1.87
U1.23-201ENST00000610293 CCDC88CQ9P219 2028 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PDE4DIPQ5VU43 2346 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 HELZP42694 1942 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 HTTP42858 3142 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 LOC102724159A0A0B4J2E5 919 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TCRBV9S1A1TA0A576 114 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 RBM47A0AV96 593 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 BCLAF3A2AJT9 711 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 HMX2A2RU54 273 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CFAP69A5D8W1 941 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 FAM159BA6NKW6 160 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CXorf49A8MYA2 514 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 M0QYV0 167 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 KLF11O14901 512 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 MCF2LO15068 1137 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 MDM4O15151 490 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TM9SF1O15321 606 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CHADO15335 359 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PAPSS1O43252 624 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 HBP1O60381 514 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TSPAN1O60635 241 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 UGT1A9O60656 530 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 DNAJC6O75061 913 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 SNNO75324 88 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 RFPL1O75677 317 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PIAS1O75925 651 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 DCTN3O75935 186 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CBX6O95503 412 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 GSRP00390 522 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 IFNB1P01574 187 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 HMGCRP04035 888 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 ITGB3P05106 788 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PRKCGP05129 697 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 LGALS2P05162 132 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PGK2P07205 417 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 DLDP09622 509 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 SRGAP2CP0DJJ0 459 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TPBGLP0DKB5 382 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CSH1P0DML2 217 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CSH2P0DML3 217 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 RBP3P10745 1247 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 VDRP11473 427 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 KRT3P12035 628 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CD19P15391 556 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 ARF4P18085 180 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 KRT4P19013 534 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TFE3P19532 575 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 TPSB2P20231 275 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 GPD1P21695 349 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TGM2P21980 687 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CCND1P24385 295 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PRKCHP24723 683 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TARSP26639 723 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 MARK3P27448 753 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 EPHB2P29323 1055 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 POLR2BP30876 1174 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 ATICP31939 592 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 GJA5P36382 358 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CETN2P41208 172 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 ELK3P41970 407 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 SSR1P43307 286 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 PTPN9P43378 593 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 NDST1P52848 882 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CDH6P55285 790 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 HDAC4P56524 1084 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 SLC8A3P57103 927 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 GEMIN4P57678 1058 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 EIF3EP60228 445 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 DYNLT1P63172 113 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 LACTBP83111 547 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 CDK16Q00536 496 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 OCRLQ01968 901 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 ROR1Q01973 937 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 FAAP100Q0VG06 881 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 SLC10A2Q12908 348 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 PTK7Q13308 1070 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TUBB3Q13509 450 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 PWP2Q15269 919 aaKnown RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 TPSAB1Q15661 275 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 KLHL38Q2WGJ6 581 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 SLC10A6Q3KNW5 377 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 BBS9Q3SYG4 887 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 KBTBD12Q3ZCT8 623 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 CCDC14Q49A88 953 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 WASHC2DQ5SRD0 308 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 GJC2Q5T442 439 aaPredicted RBP3.37□□□□□ -1.87
U1.23-201ENST00000610293 HHATQ5VTY9 493 aa3.37□□□□□ -1.87
U1.23-201ENST00000610293 TAPT1Q6NXT6 567 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms