RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TCEAL6Q6IPX3 200 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 SYT13Q7L8C5 426 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 TMEM150AQ86TG1 271 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 C2orf15Q8WU43 125 aaKnown RBP14.49□□□□□ -0.09
CTSA-218ENST00000607814 TMEM174Q8WUU8 243 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 GATA6Q92908 595 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 TCEAL3Q969E4 200 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 PCED1BQ96HM7 432 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 APOBEC3GQ9HC16 384 aaKnown RBP14.49□□□□□ -0.09
CTSA-218ENST00000607814 GKN1Q9NS71 199 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 TMEM30AQ9NV96 361 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 MAGEC2Q9UBF1 373 aaPredicted RBP14.49□□□□□ -0.09
CTSA-218ENST00000607814 HMGXB4Q9UGU5 601 aa14.49□□□□□ -0.09
CTSA-218ENST00000607814 GCN1Q92616 2671 aaKnown RBP14.49□□□□□ -0.09
CTSA-218ENST00000607814 SMG1Q96Q15 3661 aaKnown RBP14.48□□□□□ -0.09
CTSA-218ENST00000607814 SRRM3A6NNA2 597 aaPredicted RBP14.48□□□□□ -0.09
CTSA-218ENST00000607814 GIPC1O14908 333 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 CETN3O15182 167 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 RNF40O75150 1001 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 TACC1O75410 805 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 APBB3O95704 486 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 HOXB3P14651 431 aaPredicted RBP14.48□□□□□ -0.09
CTSA-218ENST00000607814 DDX6P26196 483 aaKnown RBP eCLIP14.48□□□□□ -0.09
CTSA-218ENST00000607814 ATICP31939 592 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 GRIK1P39086 918 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 AP3M2P53677 418 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 STX17P56962 302 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 SMARCB1Q12824 385 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 NFIL3Q16649 462 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 SGSM1Q2NKQ1 1148 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 EDRF1Q3B7T1 1238 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 TXNDC8Q6A555 127 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 LRSAM1Q6UWE0 723 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 INTS8Q75QN2 995 aaKnown RBP14.48□□□□□ -0.09
CTSA-218ENST00000607814 CMTM8Q8IZV2 173 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 TTC16Q8NEE8 873 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 CCDC26Q8TAB7 109 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 SEMA4DQ92854 862 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 ACDQ96AP0 544 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 SLC46A2Q9BY10 475 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 B3GNT5Q9BYG0 378 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 ZNF518BQ9C0D4 1074 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 KIF9Q9HAQ2 790 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 TMEM9BQ9NQ34 198 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 HPS4Q9NQG7 708 aa14.48□□□□□ -0.09
CTSA-218ENST00000607814 HOOK1Q9UJC3 728 aaKnown RBP14.48□□□□□ -0.09
CTSA-218ENST00000607814 SETXQ7Z333 2677 aaKnown RBP14.48□□□□□ -0.09
CTSA-218ENST00000607814 ATG2BQ96BY7 2078 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 PPP1R3GB7ZBB8 358 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 IKBKBO14920 756 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 KHNYNO15037 678 aaKnown RBP14.47□□□□□ -0.09
CTSA-218ENST00000607814 STAU1O95793 577 aaKnown RBP14.47□□□□□ -0.09
CTSA-218ENST00000607814 F11P03951 625 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 AVPR1AP37288 418 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 USP46P62068 366 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 IFRD2Q12894 506 aaPredicted RBP14.47□□□□□ -0.09
CTSA-218ENST00000607814 DCAF17Q5H9S7 520 aaPredicted RBP14.47□□□□□ -0.09
CTSA-218ENST00000607814 TCERG1LQ5VWI1 586 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 ACOT1Q86TX2 421 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 MAB21L3Q8N8X9 362 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 MYCBPAPQ8TBZ2 947 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 CHFRQ96EP1 664 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 HHIPQ96QV1 700 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 CYP2S1Q96SQ9 504 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 TSG101Q99816 390 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 SCNM1Q9BWG6 230 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 CTNND2Q9UQB3 1225 aa14.47□□□□□ -0.09
CTSA-218ENST00000607814 NUP205Q92621 2012 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 F8VP50 259 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 MAPK13O15264 365 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 TADA3O75528 432 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 ASS1P00966 412 aaKnown RBP14.46□□□□□ -0.09
CTSA-218ENST00000607814 EGFP01133 1207 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 EPB41P11171 864 aaKnown RBP14.46□□□□□ -0.09
CTSA-218ENST00000607814 CD58P19256 250 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 ASPAP45381 313 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 NDST1P52848 882 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 NLRP12P59046 1061 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 UBE2HP62256 183 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 RPL10AP62906 217 aaKnown RBP14.46□□□□□ -0.09
CTSA-218ENST00000607814 MORC3Q14149 939 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 PDGFRLQ15198 375 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 CFAP221Q4G0U5 840 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 CBWD6Q4V339 395 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 CBWD3Q5JTY5 395 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 CBWD5Q5RIA9 395 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 C4orf50Q6ZRC1 276 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 B3GALNT2Q8NCR0 500 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 SPATA18Q8TC71 538 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 NELFBQ8WX92 580 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 TWNKQ96RR1 684 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 KCNK16Q96T55 309 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 DUSP9Q99956 384 aaKnown RBP14.46□□□□□ -0.09
CTSA-218ENST00000607814 P2RY13Q9BPV8 354 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 MED10Q9BTT4 135 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 EBF3Q9H4W6 596 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 VRTNQ9H8Y1 702 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 TRPC7Q9HCX4 862 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 ABCB6Q9NP58 842 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 FAM49BQ9NUQ9 324 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms