RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 JAM2P57087 298 aa15.04■□□□□ -0
CTSA-211ENST00000606066 CYP4F8P98187 520 aa15.04■□□□□ -0
CTSA-211ENST00000606066 PKDCCQ504Y2 493 aa15.04■□□□□ -0
CTSA-211ENST00000606066 TMEM150AQ86TG1 271 aa15.04■□□□□ -0
CTSA-211ENST00000606066 SLC47A2Q86VL8 602 aa15.04■□□□□ -0
CTSA-211ENST00000606066 MON1AQ86VX9 555 aa15.04■□□□□ -0
CTSA-211ENST00000606066 ZSCAN18Q8TBC5 510 aaPredicted RBP15.04■□□□□ -0
CTSA-211ENST00000606066 SLC35F5Q8WV83 523 aa15.04■□□□□ -0
CTSA-211ENST00000606066 KCTD13Q8WZ19 329 aa15.04■□□□□ -0
CTSA-211ENST00000606066 SMARCD2Q92925 531 aa15.04■□□□□ -0
CTSA-211ENST00000606066 SECISBP2LQ93073 1101 aaKnown RBP15.04■□□□□ -0
CTSA-211ENST00000606066 E2F7Q96AV8 911 aa15.04■□□□□ -0
CTSA-211ENST00000606066 IQCDQ96DY2 449 aa15.04■□□□□ -0
CTSA-211ENST00000606066 HSFY1Q96LI6 401 aa15.04■□□□□ -0
CTSA-211ENST00000606066 ZSWIM1Q9BR11 485 aa15.04■□□□□ -0
CTSA-211ENST00000606066 EDEM3Q9BZQ6 932 aa15.04■□□□□ -0
CTSA-211ENST00000606066 PDCL3Q9H2J4 239 aa15.04■□□□□ -0
CTSA-211ENST00000606066 ACP6Q9NPH0 428 aa15.04■□□□□ -0
CTSA-211ENST00000606066 PCDHGC3Q9UN70 934 aa15.04■□□□□ -0
CTSA-211ENST00000606066 SCML2Q9UQR0 700 aa15.04■□□□□ -0
CTSA-211ENST00000606066 CEP83Q9Y592 693 aa15.04■□□□□ -0
CTSA-211ENST00000606066 RIF1Q5UIP0 2472 aaKnown RBP15.04■□□□□ -0
CTSA-211ENST00000606066 ZNF840PA6NDX5 716 aa15.03■□□□□ -0
CTSA-211ENST00000606066 PROB1E7EW31 1015 aa15.03■□□□□ -0
CTSA-211ENST00000606066 ANHXE9PGG2 379 aa15.03■□□□□ -0
CTSA-211ENST00000606066 ABL1P00519 1130 aa15.03■□□□□ -0
CTSA-211ENST00000606066 CALCAP01258 141 aa15.03■□□□□ -0
CTSA-211ENST00000606066 PNMA6AP0CW24 399 aaPredicted RBP15.03■□□□□ -0
CTSA-211ENST00000606066 CYP11B1P15538 503 aa15.03■□□□□ -0
CTSA-211ENST00000606066 WEE1P30291 646 aa15.03■□□□□ -0
CTSA-211ENST00000606066 AVPR1AP37288 418 aa15.03■□□□□ -0
CTSA-211ENST00000606066 VCPP55072 806 aaKnown RBP15.03■□□□□ -0
CTSA-211ENST00000606066 FIGNQ5HY92 759 aa15.03■□□□□ -0
CTSA-211ENST00000606066 RAB41Q5JT25 222 aa15.03■□□□□ -0
CTSA-211ENST00000606066 ZNF677Q86XU0 584 aa15.03■□□□□ -0
CTSA-211ENST00000606066 UBALD2Q8IYN6 164 aa15.03■□□□□ -0
CTSA-211ENST00000606066 STK32AQ8WU08 396 aa15.03■□□□□ -0
CTSA-211ENST00000606066 ZSWIM3Q96MP5 696 aa15.03■□□□□ -0
CTSA-211ENST00000606066 ASB16Q96NS5 453 aa15.03■□□□□ -0
CTSA-211ENST00000606066 NOX5Q96PH1 765 aa15.03■□□□□ -0
CTSA-211ENST00000606066 LHX5Q9H2C1 402 aa15.03■□□□□ -0
CTSA-211ENST00000606066 KCNK12Q9HB15 430 aa15.03■□□□□ -0
CTSA-211ENST00000606066 ZFP14Q9HCL3 533 aa15.03■□□□□ -0
CTSA-211ENST00000606066 TLR8Q9NR97 1041 aaKnown RBP15.03■□□□□ -0
CTSA-211ENST00000606066 CHORDC1Q9UHD1 332 aaPredicted RBP15.03■□□□□ -0
CTSA-211ENST00000606066 MYO6Q9UM54 1294 aa15.03■□□□□ -0
CTSA-211ENST00000606066 USP3Q9Y6I4 520 aa15.03■□□□□ -0
CTSA-211ENST00000606066 TRAV19A0A0A6YYK7 116 aa15.02■□□□□ -0
CTSA-211ENST00000606066 ECI2O75521 394 aa15.02■□□□□ -0
CTSA-211ENST00000606066 TADA3O75528 432 aa15.02■□□□□ -0
CTSA-211ENST00000606066 GFPT2O94808 682 aa15.02■□□□□ -0
CTSA-211ENST00000606066 GPD2P43304 727 aa15.02■□□□□ -0
CTSA-211ENST00000606066 ACADSBP45954 432 aa15.02■□□□□ -0
CTSA-211ENST00000606066 PSEN1P49768 467 aa15.02■□□□□ -0
CTSA-211ENST00000606066 TKTL1P51854 596 aa15.02■□□□□ -0
CTSA-211ENST00000606066 SNX16P57768 344 aa15.02■□□□□ -0
CTSA-211ENST00000606066 PLCB2Q00722 1185 aa15.02■□□□□ -0
CTSA-211ENST00000606066 FAM78AQ5JUQ0 283 aa15.02■□□□□ -0
CTSA-211ENST00000606066 STXBP5Q5T5C0 1151 aa15.02■□□□□ -0
CTSA-211ENST00000606066 SNX30Q5VWJ9 437 aa15.02■□□□□ -0
CTSA-211ENST00000606066 TXNDC8Q6A555 127 aa15.02■□□□□ -0
CTSA-211ENST00000606066 DENND1BQ6P3S1 775 aa15.02■□□□□ -0
CTSA-211ENST00000606066 GPRIN1Q7Z2K8 1008 aa15.02■□□□□ -0
CTSA-211ENST00000606066 CCDC186Q7Z3E2 898 aa15.02■□□□□ -0
CTSA-211ENST00000606066 CMTM8Q8IZV2 173 aa15.02■□□□□ -0
CTSA-211ENST00000606066 SIX6OS1Q8N1H7 587 aa15.02■□□□□ -0
CTSA-211ENST00000606066 ARHGAP18Q8N392 663 aa15.02■□□□□ -0
CTSA-211ENST00000606066 MAB21L3Q8N8X9 362 aa15.02■□□□□ -0
CTSA-211ENST00000606066 ELSPBP1Q96BH3 223 aa15.02■□□□□ -0
CTSA-211ENST00000606066 SLC46A2Q9BY10 475 aa15.02■□□□□ -0
CTSA-211ENST00000606066 XPO4Q9C0E2 1151 aaKnown RBP15.02■□□□□ -0
CTSA-211ENST00000606066 TRPV4Q9HBA0 871 aa15.02■□□□□ -0
CTSA-211ENST00000606066 TRPC7Q9HCX4 862 aa15.02■□□□□ -0
CTSA-211ENST00000606066 GMIPQ9P107 970 aa15.02■□□□□ -0
CTSA-211ENST00000606066 NUMBLQ9Y6R0 609 aa15.02■□□□□ -0
CTSA-211ENST00000606066 TULP2O00295 520 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 NRG2O14511 850 aaPredicted RBP15.01□□□□□ -0.01
CTSA-211ENST00000606066 DPYSL4O14531 572 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 GFRA3O60609 400 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 ZBED1O96006 694 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 ZDHHC11BP0C7U3 371 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 HDCP19113 662 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 PBX1P40424 430 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 TUBP50607 506 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 TDGQ13569 410 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 HTR4Q13639 388 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 HECTD3Q5T447 861 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 PMF1Q6P1K2 205 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 PARM1Q6UWI2 310 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 ARID3BQ8IVW6 561 aaPredicted RBP15.01□□□□□ -0.01
CTSA-211ENST00000606066 ZNF397Q8NF99 534 aaPredicted RBP15.01□□□□□ -0.01
CTSA-211ENST00000606066 ATOH1Q92858 354 aaPredicted RBP15.01□□□□□ -0.01
CTSA-211ENST00000606066 NUCKS1Q9H1E3 243 aaKnown RBP15.01□□□□□ -0.01
CTSA-211ENST00000606066 RBSNQ9H1K0 784 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 CYLDQ9NQC7 956 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 CNGB3Q9NQW8 809 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 SORCS3Q9UPU3 1222 aa15.01□□□□□ -0.01
CTSA-211ENST00000606066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms