RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ATP6V0A2Q9Y487 856 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 TTLL3Q9Y4R7 772 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 TELO2Q9Y4R8 837 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 PCDHA3Q9Y5H8 950 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC12A7Q9Y666 1083 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 AKAP11Q9UKA4 1901 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 KIF13BQ9NQT8 1826 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 FER1L4A9Z1Z3 1794 aa4.3□□□□□ -1.72
HMGB1P50-201ENST00000605814 RIMS1Q86UR5 1692 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 MYPNQ86TC9 1320 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ARHGAP10A1A4S6 786 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SH3PXD2BA1X283 911 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 KRIT1O00522 736 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 KCNK3O14649 394 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PRPF4O43172 522 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 RIPK2O43353 540 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 TPD52L2O43399 206 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 TBX10O75333 385 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 FKBP6O75344 327 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SERPINB7O75635 380 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 IL1BP01584 269 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ATP5BP06576 529 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PLEKP08567 350 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CTSHP09668 335 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CDK4P11802 303 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 INSRRP14616 1297 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CHRNA3P32297 505 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 GTF2H1P32780 548 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 BMP8BP34820 402 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 KRT2P35908 639 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 MLH1P40692 756 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCNFP41002 786 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC1A4P43007 532 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 RPL5P46777 297 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAPKAPK2P49137 400 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NT5C2P49902 561 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCT8P50990 548 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NEK2P51955 445 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PMS1P54277 932 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 HADHBP55084 474 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 IL9RQ01113 521 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 AMPD3Q01432 767 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 LRRC63Q05C16 580 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CDK18Q07002 472 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 AIMP1Q12904 312 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC29A2Q14542 456 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 RTP5Q14D33 572 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NONOQ15233 471 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCDC6Q16204 474 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 INAQ16352 499 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CYP1B1Q16678 543 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 TTC38Q5R3I4 469 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 BICRALQ6AI39 1079 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CGB2Q6NT52 195 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CRTC3Q6UUV7 619 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZDHHC24Q6UX98 284 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 INTS8Q75QN2 995 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 RRAGAQ7L523 313 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 HS2ST1Q7LGA3 356 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NLRC3Q7RTR2 1065 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PHLDB2Q86SQ0 1253 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLCO6A1Q86UG4 719 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NT5DC3Q86UY8 548 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 FAM186BQ8IYM0 893 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ARHGAP24Q8N264 748 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ANKRD35Q8N283 1001 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 GUF1Q8N442 669 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SYT2Q8N9I0 419 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SCAIQ8N9R8 606 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 FANCBQ8NB91 859 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 FNDC8Q8TC99 324 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PLEKHO2Q8TD55 490 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 DENND1AQ8TEH3 1009 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 DDI1Q8WTU0 396 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 GAB3Q8WWW8 586 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ESR2Q92731 530 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLCO2A1Q92959 643 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ART4Q93070 314 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PHKBQ93100 1093 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SGF29Q96ES7 293 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 NSL1Q96IY1 281 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CNOT6LQ96LI5 555 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 DHRS1Q96LJ7 313 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 AK8Q96MA6 479 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 BIRC8Q96P09 236 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 BTBD9Q96Q07 612 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 ARPC5LQ9BPX5 153 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SELENOSQ9BQE4 189 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 CADM1Q9BY67 442 aaKnown RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 MYLK2Q9H1R3 596 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 AZI2Q9H6S1 392 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PPCSQ9HAB8 311 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 TNFRSF12AQ9NP84 129 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 RIC8AQ9NPQ8 531 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 AP5S1Q9NUS5 200 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 UBAP1Q9NZ09 502 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 HESX1Q9UBX0 185 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 PPP1R1BQ9UD71 204 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 SUSD2Q9UGT4 822 aa4.29□□□□□ -1.72
HMGB1P50-201ENST00000605814 HERC5Q9UII4 1024 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms