RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PMF1Q6P1K2 205 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 DENND1BQ6P3S1 775 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 RNF135Q8IUD6 432 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 CMTM8Q8IZV2 173 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 ZNF276Q8N554 614 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 ZSCAN18Q8TBC5 510 aaPredicted RBP14.62□□□□□ -0.07
RNF40-212ENST00000602784 EPS8L1Q8TE68 723 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 DDX1Q92499 740 aaKnown RBP14.62□□□□□ -0.07
RNF40-212ENST00000602784 BAP1Q92560 729 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 RBSNQ9H1K0 784 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 SLITRK6Q9H5Y7 841 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 KCNK12Q9HB15 430 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 LRRC4Q9HBW1 653 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 TLR8Q9NR97 1041 aaKnown RBP14.62□□□□□ -0.07
RNF40-212ENST00000602784 ITIH6Q6UXX5 1313 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 TRAV19A0A0A6YYK7 116 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 ECI2O75521 394 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 FBXO21O94952 628 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 LSM8O95777 96 aaKnown RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 ZBED1O96006 694 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 FERP16591 822 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 CDH5P33151 784 aaPredicted RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 ACADSBP45954 432 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 CYP4F8P98187 520 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 IFRD2Q12894 506 aaPredicted RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 PTPN21Q16825 1174 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 TXNDC8Q6A555 127 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 TMEM110Q86TL2 294 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 NOP9Q86U38 636 aaKnown RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 ARHGAP18Q8N392 663 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 WDTC1Q8N5D0 677 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 MAB21L3Q8N8X9 362 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 ELSPBP1Q96BH3 223 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 SLC4A5Q9BY07 1137 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 NUCKS1Q9H1E3 243 aaKnown RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 ZFP14Q9HCL3 533 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 CNGB3Q9NQW8 809 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 OBP2AQ9NY56 170 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 CLIC5Q9NZA1 410 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 AIPL1Q9NZN9 384 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 GMIPQ9P107 970 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 CHORDC1Q9UHD1 332 aaPredicted RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 NOCTQ9UK39 431 aaKnown RBP14.61□□□□□ -0.07
RNF40-212ENST00000602784 CEP83Q9Y592 693 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.61□□□□□ -0.07
RNF40-212ENST00000602784 OBSL1O75147 1896 aa14.61□□□□□ -0.07
RNF40-212ENST00000602784 GABBR2O75899 941 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 OLFM2O95897 454 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 OAS1P00973 400 aaKnown RBP14.6□□□□□ -0.07
RNF40-212ENST00000602784 CFHP08603 1231 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 USP17L7P0C7H9 530 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 HDCP19113 662 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 FCARP24071 287 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 AVPR1AP37288 418 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 SNX16P57768 344 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 CDR2Q01850 454 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 ZNF268Q14587 947 aaPredicted RBP14.6□□□□□ -0.07
RNF40-212ENST00000602784 HECTD3Q5T447 861 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 PARM1Q6UWI2 310 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 IRF2BP2Q7Z5L9 587 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 ARID3BQ8IVW6 561 aaPredicted RBP14.6□□□□□ -0.07
RNF40-212ENST00000602784 SIX6OS1Q8N1H7 587 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 TMEM35BQ8NCS4 154 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 IRGQQ8WZA9 623 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 SYN2Q92777 582 aaPredicted RBP14.6□□□□□ -0.07
RNF40-212ENST00000602784 FGF14Q92915 247 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 NOX5Q96PH1 765 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 CAPN11Q9UMQ6 739 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 ANAPC1Q9H1A4 1944 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 VCANP13611 3396 aa14.6□□□□□ -0.07
RNF40-212ENST00000602784 MYO10Q9HD67 2058 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 C2orf78A6NCI8 922 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 SLC7A9P82251 487 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 ADIGQ0VDE8 80 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 PDCLQ13371 301 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 TDGQ13569 410 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 SPECC1LQ69YQ0 1117 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 TANGO2Q6ICL3 276 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 KLHDC10Q6PID8 442 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 TRIM72Q6ZMU5 477 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 SCD5Q86SK9 330 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 SLC44A3Q8N4M1 653 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 CELF5Q8N6W0 485 aaKnown RBP14.59□□□□□ -0.07
RNF40-212ENST00000602784 KIAA1958Q8N8K9 716 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 ZNF397Q8NF99 534 aaPredicted RBP14.59□□□□□ -0.07
RNF40-212ENST00000602784 CDK5RAP1Q96SZ6 601 aaKnown RBP14.59□□□□□ -0.07
RNF40-212ENST00000602784 ULBP1Q9BZM6 244 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 PDCL3Q9H2J4 239 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 KIF9Q9HAQ2 790 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 TRPC7Q9HCX4 862 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 CYTH4Q9UIA0 394 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 SORCS3Q9UPU3 1222 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 NUMBLQ9Y6R0 609 aa14.59□□□□□ -0.07
RNF40-212ENST00000602784 A0A1W2PQH9 124 aa14.58□□□□□ -0.08
RNF40-212ENST00000602784 LRRC53A6NM62 1247 aa14.58□□□□□ -0.08
RNF40-212ENST00000602784 SART1O43290 800 aaKnown RBP14.58□□□□□ -0.08
RNF40-212ENST00000602784 ABL1P00519 1130 aa14.58□□□□□ -0.08
RNF40-212ENST00000602784 CKMP06732 381 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms