RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MAGEB2O15479 319 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 GLRA3O75311 464 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 GTF2H1P32780 548 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 HARS2P49590 506 aaKnown RBP9.92□□□□□ -0.82
CSMD1-217ENST00000602723 EFHC1Q5JVL4 640 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 KLHL17Q6TDP4 642 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 CLEC4MQ9H2X3 399 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-217ENST00000602723 QTRT2Q9H974 415 aaKnown RBP9.92□□□□□ -0.82
CSMD1-217ENST00000602723 TFR2Q9UP52 801 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 SH3BP1Q9Y3L3 701 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 KRT6BP04259 564 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 FAM58BPP0C7Q3 252 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 DARSP14868 501 aaKnown RBP9.92□□□□□ -0.82
CSMD1-217ENST00000602723 RGS2P41220 211 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 KRT6CP48668 564 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 PRKCQQ04759 706 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 PDZK1Q5T2W1 519 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 C2orf81A6NN90 581 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 CDC16Q13042 620 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 CDH18Q13634 790 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 ARMC6Q6NXE6 501 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 COPG2Q9UBF2 871 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 NAGPAQ9UK23 515 aa9.92□□□□□ -0.82
CSMD1-217ENST00000602723 SNAP23O00161 211 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 SNUPNO95149 360 aaKnown RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 TXNP10599 105 aaKnown RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 XKR3Q5GH77 459 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 C10orf120Q5SQS8 335 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 WDR93Q6P2C0 686 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 PPP2R3CQ969Q6 453 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 STK39Q9UEW8 545 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 GLRBP48167 497 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ATP12AP54707 1039 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 PLA2G4FQ68DD2 849 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 NAIF1Q69YI7 327 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ERGIC2Q96RQ1 377 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 FAM192AQ9GZU8 254 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 MBD2Q9UBB5 411 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 C21orf2O43822 256 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ALDH1A2O94788 518 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 UBOX5O94941 541 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 SLC2A3P11169 496 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 DDX39BQ13838 428 aaKnown RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 VN1R5Q7Z5H4 357 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 DEFB107AQ8IZN7 70 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 DNAJC7Q99615 494 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 CEP44Q9C0F1 390 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 UBAP1Q9NZ09 502 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 DOLKQ9UPQ8 538 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 HPS5Q9UPZ3 1129 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 MYO3AQ8NEV4 1616 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 IFNA14P01570 189 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 PIK3R1P27986 724 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 NDUFA5Q16718 116 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 TRAPPC9Q96Q05 1148 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 PAFAH2Q99487 392 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 DDX20Q9UHI6 824 aaKnown RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 LRCH1Q9Y2L9 728 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 PXDNLA1KZ92 1463 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ROBO2Q9HCK4 1378 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 FAM25AB3EWG3 89 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 FAM25CB3EWG5 89 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 FAM25GB3EWG6 89 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 KLRC1P26715 233 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 RFC5P40937 340 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 RFX3P48380 749 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ATG16L2Q8NAA4 619 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 MIEF2Q96C03 454 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ASXL3Q9C0F0 2248 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 RARBP10826 455 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 TAB1Q15750 504 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 STRA8Q7Z7C7 330 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 TRIM63Q969Q1 353 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 COMMD8Q9NX08 183 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 KLHL3Q9UH77 587 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 CHD4Q14839 1912 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 TRIM43BA6NCK2 446 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 BAIAP3O94812 1187 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 IRF1P10914 325 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 HMGCS2P54868 508 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 DGKKQ5KSL6 1271 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 SYNE4Q8N205 404 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 FBXO36Q8NEA4 188 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 RDM1Q8NG50 284 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 UBASH3BQ8TF42 649 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 PPP1R10Q96QC0 940 aaKnown RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 NMRK2Q9NPI5 230 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ERAP2Q6P179 960 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 ACSF2Q96CM8 615 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 BTBD7Q9P203 1132 aa9.91□□□□□ -0.82
CSMD1-217ENST00000602723 MYH14Q7Z406 1995 aaKnown RBP9.91□□□□□ -0.82
CSMD1-217ENST00000602723 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 ARMC3Q5W041 872 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 MRNIPQ6NTE8 343 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 PRMT9Q6P2P2 845 aa9.9□□□□□ -0.82
CSMD1-217ENST00000602723 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-217ENST00000602723 MAGED4Q96JG8 741 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms