RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TSPY2A6NKD2 308 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TCP11X1B4DZS4 312 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TBX3O15119 743 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CDH16O75309 829 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 IFNA16P05015 189 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TSPY3P0CV98 308 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TSPY8P0CW00 308 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CYP3A7P24462 503 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PON1P27169 355 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 GP5P40197 560 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 EIF4A1P60842 406 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TSPY1Q01534 308 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 GFPT1Q06210 699 aaPredicted RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 IFIT5Q13325 482 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 RFTN1Q14699 578 aaPredicted RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SLC15A2Q16348 729 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PTPN21Q16825 1174 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SLC45A4Q5BKX6 768 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 LDLRAD1Q5T700 205 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 BNC2Q6ZN30 1099 aaPredicted RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 RAVER1Q8IY67 606 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF34Q8IZ26 560 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 LRRC71Q8N4P6 559 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CATSPER1Q8NEC5 780 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TGFBRAP1Q8WUH2 860 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 BRINP2Q9C0B6 783 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 MTFR1LQ9H019 292 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 WNT5BQ9H1J7 359 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 LHX5Q9H2C1 402 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 RAVER2Q9HCJ3 691 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 LRRC4BQ9NT99 713 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SYBUQ9NX95 663 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 GDAP2Q9NXN4 497 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PRKAG2Q9UGJ0 569 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ADGRE2Q9UHX3 823 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ENOPH1Q9UHY7 261 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 MAU2Q9Y6X3 613 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 MAST3O60307 1309 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 C16orf96A6NNT2 1141 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TOR1AO14656 332 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 GSC2O15499 205 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TEX33O43247 280 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 ZBTB14O43829 449 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 EEF2P13639 858 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SELLP14151 372 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 GUCY1A2P33402 732 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 HTR7P34969 479 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF76P36508 570 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NKX2-5P52952 324 aaPredicted RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 C21orf58P58505 322 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 GALK2Q01415 458 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CENPCQ03188 943 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SPAG1Q07617 926 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 MMEL1Q495T6 779 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 EARS2Q5JPH6 523 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SNAP47Q5SQN1 464 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 RFWD3Q6PCD5 774 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 LPCAT2Q7L5N7 544 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NIPA1Q7RTP0 329 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 GPR142Q7Z601 462 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CCDC36Q8IYA8 594 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TBC1D15Q8TC07 691 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SCFD2Q8WU76 684 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NCLNQ969V3 563 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TMEM80Q96HE8 168 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 MAGEB18Q96M61 343 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TMEM79Q9BSE2 394 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CINPQ9BW66 212 aaPredicted RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 C6orf62Q9GZU0 229 aaPredicted RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SLC6A17Q9H1V8 727 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 KCNK13Q9HB14 408 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 ATP13A1Q9HD20 1204 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TMEM59LQ9UK28 342 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CHKBQ9Y259 395 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 EIF3LQ9Y262 564 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CPQQ9Y646 472 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 A2ML1A8K2U0 1454 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF839A8K0R7 811 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 GOLGA8SH3BPF8 625 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SSX5O60225 188 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 PGK2P07205 417 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 KRT3P12035 628 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CCDC130P13994 396 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 RFC1P35251 1148 aaPredicted RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 IDUAP35475 653 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 SYKP43405 635 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 OR3A3P47888 321 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NPY2RP49146 381 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 COPB1P53618 953 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NLRP11P59045 1033 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 FAPQ12884 760 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NECTIN1Q15223 517 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 PXDC1Q5TGL8 231 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms