RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 LMO3Q8TAP4 145 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 ATOH1Q92858 354 aaPredicted RBP18.17■□□□□ 0.5
HERC3-214ENST00000601319 ATP2A3Q93084 1043 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 NT5C1BQ96P26 610 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 DUSP16Q9BY84 665 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 NDRG2Q9UN36 371 aaKnown RBP18.17■□□□□ 0.5
HERC3-214ENST00000601319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
HERC3-214ENST00000601319 FRYLO94915 3013 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 AFPP02771 609 aaKnown RBP18.16■□□□□ 0.5
HERC3-214ENST00000601319 KCNA4P22459 653 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 SOX9P48436 509 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 ZXDBP98169 803 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 KCNH2Q12809 1159 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 LRRC32Q14392 662 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 HECTD3Q5T447 861 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 TXNDC11Q6PKC3 985 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 GPRIN1Q7Z2K8 1008 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 HEXIM2Q96MH2 286 aaKnown RBP18.16■□□□□ 0.5
HERC3-214ENST00000601319 IPO9Q96P70 1041 aaKnown RBP18.16■□□□□ 0.5
HERC3-214ENST00000601319 MED15Q96RN5 788 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 RNF38Q9H0F5 515 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 EBF3Q9H4W6 596 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 DUS2Q9NX74 493 aaKnown RBP18.16■□□□□ 0.5
HERC3-214ENST00000601319 GMIPQ9P107 970 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 FBXO4Q9UKT5 387 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 SCML2Q9UQR0 700 aa18.16■□□□□ 0.5
HERC3-214ENST00000601319 LEFTY2O00292 366 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 COCHO43405 550 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 ABL1P00519 1130 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 CHRNB1P11230 501 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 IFNAR2P48551 515 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 AMPD2Q01433 879 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 GCNT1Q02742 428 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 EML3Q32P44 896 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 ZNF528Q3MIS6 628 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 TRIM68Q6AZZ1 485 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 MAML2Q8IZL2 1156 aaPredicted RBP18.15■□□□□ 0.5
HERC3-214ENST00000601319 CHFRQ96EP1 664 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 CNOT6LQ96LI5 555 aaKnown RBP18.15■□□□□ 0.5
HERC3-214ENST00000601319 UBXN6Q9BZV1 441 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 CYLDQ9NQC7 956 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 PRMT8Q9NR22 394 aaPredicted RBP18.15■□□□□ 0.5
HERC3-214ENST00000601319 TLR8Q9NR97 1041 aaKnown RBP18.15■□□□□ 0.5
HERC3-214ENST00000601319 FAM86C1Q9NVL1 165 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
HERC3-214ENST00000601319 KIAA1257Q9ULG3 409 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 CPQQ9Y646 472 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 WNT6Q9Y6F9 365 aa18.15■□□□□ 0.5
HERC3-214ENST00000601319 ZFHX2Q9C0A1 2572 aaPredicted RBP18.15■□□□□ 0.5
HERC3-214ENST00000601319 ZNF292O60281 2723 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 OTOL1A6NHN0 477 aaPredicted RBP18.14■□□□□ 0.49
HERC3-214ENST00000601319 ARSAP15289 507 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 ERCC5P28715 1186 aaPredicted RBP18.14■□□□□ 0.49
HERC3-214ENST00000601319 KIF11P52732 1056 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 DPCR1Q3MIW9 517 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 DGKKQ5KSL6 1271 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 CCDC186Q7Z3E2 898 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 ANKRD52Q8NB46 1076 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 ZFRQ96KR1 1074 aaKnown RBP18.14■□□□□ 0.49
HERC3-214ENST00000601319 PHOX2BQ99453 314 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 DACH1Q9UI36 760 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 USP3Q9Y6I4 520 aa18.14■□□□□ 0.49
HERC3-214ENST00000601319 SLC9A3R1O14745 358 aaPredicted RBP18.13■□□□□ 0.49
HERC3-214ENST00000601319 CYP26A1O43174 497 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 LAMTOR5O43504 91 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 PAEPP09466 180 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 MBL2P11226 248 aaPredicted RBP18.13■□□□□ 0.49
HERC3-214ENST00000601319 ACO1P21399 889 aaKnown RBP18.13■□□□□ 0.49
HERC3-214ENST00000601319 PSEN1P49768 467 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 BCAT1P54687 386 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 SLC8A3P57103 927 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 LRMPQ12912 555 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 MTAPQ13126 283 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 CCINQ13939 588 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 SGO2Q562F6 1265 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 CT47A1Q5JQC4 288 aaPredicted RBP18.13■□□□□ 0.49
HERC3-214ENST00000601319 IRF2BP1Q8IU81 584 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 PPM1KQ8N3J5 372 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 SYNPOQ8N3V7 929 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 EHBP1Q8NDI1 1231 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 TTC8Q8TAM2 541 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 JAKMIP2Q96AA8 810 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 CCSER2Q9H7U1 834 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 ECT2Q9H8V3 914 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 LMAN1LQ9HAT1 526 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 CHORDC1Q9UHD1 332 aaPredicted RBP18.13■□□□□ 0.49
HERC3-214ENST00000601319 DMDP11532 3685 aa18.13■□□□□ 0.49
HERC3-214ENST00000601319 MYOFQ9NZM1 2061 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 E2F8A0AVK6 867 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 GOLGA6L22H0YM25 854 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 TRDMT1O14717 391 aaKnown RBP18.12■□□□□ 0.49
HERC3-214ENST00000601319 TLR5O60602 858 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 NFATC1O95644 943 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 SP9P0CG40 484 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 VDRP11473 427 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 MRE11P49959 708 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 PON2Q15165 354 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 TMEM196Q5HYL7 178 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 RAB41Q5JT25 222 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms