RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 ROR1Q01973 937 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-211ENST00000600927 PPP2R5EQ16537 467 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 NAA35Q5VZE5 725 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 ARHGAP17Q68EM7 881 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 RTL10Q7L3V2 364 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 ERICH1Q86X53 443 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 TMEM86AQ8N2M4 240 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 RASGEF1CQ8N431 466 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 MMGT1Q8N4V1 131 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 UBL4BQ8N7F7 174 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 APPL2Q8NEU8 664 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 ZNF564Q8TBZ8 553 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-211ENST00000600927 STK32AQ8WU08 396 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 NAP1L3Q99457 506 aaPredicted RBP12.15□□□□□ -0.46
ZNF548-211ENST00000600927 NUP85Q9BW27 656 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 CARD9Q9H257 536 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 OSGEPQ9NPF4 335 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZNF548-211ENST00000600927 SNX9Q9Y5X1 595 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 TRIOO75962 3097 aa12.15□□□□□ -0.46
ZNF548-211ENST00000600927 WDR27A2RRH5 827 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 H7C4K7 107 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 O00370 1275 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 HUS1O60921 280 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 CYP11A1P05108 521 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
ZNF548-211ENST00000600927 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 WARSP23381 471 aaKnown RBP12.14□□□□□ -0.47
ZNF548-211ENST00000600927 MCM3P25205 808 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 CTNNA2P26232 953 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
ZNF548-211ENST00000600927 MAN1A1P33908 653 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 NDST1P52848 882 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ACAP1Q15027 740 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 GLE1Q53GS7 698 aaKnown RBP12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ATAT1Q5SQI0 421 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 CCDC181Q5TID7 509 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ZNF280DQ6N043 979 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 SPATA31D4Q6ZUB0 917 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 RNF135Q8IUD6 432 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ZNF461Q8TAF7 563 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 FNIP1Q8TF40 1166 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 TFAP2BQ92481 460 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ELMO3Q96BJ8 720 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 TNIP3Q96KP6 325 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 HEXIM2Q96MH2 286 aaKnown RBP12.14□□□□□ -0.47
ZNF548-211ENST00000600927 PRKD2Q9BZL6 878 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 SMYD3Q9H7B4 428 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
ZNF548-211ENST00000600927 CCDC195A0A1B0GUA6 201 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 GABRDO14764 452 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 FTCDO95954 541 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 C8AP07357 584 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 ATF2P15336 505 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 CD19P15391 556 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
ZNF548-211ENST00000600927 GNL1P36915 607 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-211ENST00000600927 GPD2P43304 727 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 LHX1P48742 406 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 MAMLD1Q13495 774 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 CCDC70Q6NSX1 233 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 SCARA5Q6ZMJ2 495 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
ZNF548-211ENST00000600927 WDTC1Q8N5D0 677 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 C3orf20Q8ND61 904 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 CD101Q93033 1021 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 C18orf8Q96DM3 657 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-211ENST00000600927 EPHX3Q9H6B9 360 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 WDR6Q9NNW5 1121 aaKnown RBP12.13□□□□□ -0.47
ZNF548-211ENST00000600927 C11orf16Q9NQ32 467 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 NR2E1Q9Y466 385 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 SCN1AP35498 2009 aa12.13□□□□□ -0.47
ZNF548-211ENST00000600927 CLUHO75153 1309 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 TARSL2A2RTX5 802 aaKnown RBP12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SIGLEC16A6NMB1 481 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 CCDC188H7C350 402 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
ZNF548-211ENST00000600927 DCXO43602 365 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SRGAP2O75044 1071 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 VNN2O95498 520 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 RRM1P23921 792 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 SCNN1AP37088 669 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 YWHAHQ04917 246 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-211ENST00000600927 PIGHQ14442 188 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-211ENST00000600927 ERCC6LQ2NKX8 1250 aa12.12□□□□□ -0.47
ZNF548-211ENST00000600927 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms