RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 STAU1O95793 577 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 OAS1P00973 400 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 C4BPAP04003 597 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 ZNF806P0C7X5 589 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 CCDC130P13994 396 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 TCF3P15923 654 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 PFKLP17858 780 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 TIE1P35590 1138 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 MPLP40238 635 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 ABCA7Q8IZY2 2146 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 NAT16Q8N8M0 369 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 CCSER2Q9H7U1 834 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 KRT82Q9NSB4 513 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 FAM49BQ9NUQ9 324 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 GMIPQ9P107 970 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 SH3BP1Q9Y3L3 701 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 COCHO43405 550 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 AKAP3O75969 853 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 KLF8O95600 359 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 NR3C1P04150 777 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 APODP05090 189 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 P4HA1P13674 534 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 PFKFB1P16118 471 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 AP3M2P53677 418 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 GAB4Q2WGN9 574 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 USP39Q53GS9 565 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 HECTD3Q5T447 861 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 STPG1Q5TH74 334 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 EMC10Q5UCC4 262 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 ATL3Q6DD88 541 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 RHBDF2Q6PJF5 856 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 ALLCQ8N6M5 410 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 PDZD8Q8NEN9 1154 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 TNIP3Q96KP6 325 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 PNKPQ96T60 521 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 MMRN2Q9H8L6 949 aa18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 DMAP1Q9NPF5 467 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-223ENST00000600552 ADH1CP00326 375 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 ADH5P11766 374 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 PDIA4P13667 645 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 ADORA2BP29275 332 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 PIK3CAP42336 1068 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 SLC5A3P53794 718 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 MAP3K7CLP57077 242 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 MESP2Q0VG99 397 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 SGSM1Q2NKQ1 1148 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 LY6G5CQ5SRR4 150 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 PAQR9Q6ZVX9 377 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 C12orf40Q86WS4 652 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 DDX42Q86XP3 938 aaKnown RBP eCLIP18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 PGBD3Q8N328 593 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 TXNDC5Q8NBS9 432 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 SLC2A14Q8TDB8 520 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 SMARCD1Q96GM5 515 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 ZC3H10Q96K80 434 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 SPATA32Q96LK8 384 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 ARHGEF4Q9NR80 690 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 VPS45Q9NRW7 570 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 BCCIPQ9P287 314 aaKnown RBP eCLIP18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 HMGXB4Q9UGU5 601 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 MAPK8IP1Q9UQF2 711 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 TPRP12270 2363 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 THADAQ6YHU6 1953 aa18.64■□□□□ 0.57
SHKBP1-223ENST00000600552 KIAA1549LQ6ZVL6 1849 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 KAT7O95251 611 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 CAVIN2O95810 425 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 OLFM2O95897 454 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 ADRB1P08588 477 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 DHPSP49366 369 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 NDST1P52848 882 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 ANO4Q32M45 955 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 RNF43Q68DV7 783 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 FUKQ8N0W3 1084 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 C12orf29Q8N999 325 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 RLN3Q8WXF3 142 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 ERLEC1Q96DZ1 483 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 DMAC2Q9NW81 257 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 TBC1D14Q9P2M4 693 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 EBF1Q9UH73 591 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 MMP17Q9ULZ9 603 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 PCDHGA5Q9Y5G8 931 aa18.63■□□□□ 0.57
SHKBP1-223ENST00000600552 CNOT1A5YKK6 2376 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 MAP3K13O43283 966 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 CALUO43852 315 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 BEST1O76090 585 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 KIF20AO95235 890 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 HLA-DRAP01903 254 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 RPN1P04843 607 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 PRR29P0C7W0 189 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 BCKDHBP21953 392 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 PLA2G2CQ5R387 149 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 BTBD8Q5XKL5 378 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 TMEM92Q6UXU6 159 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 SV2AQ7L0J3 742 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 WBP2Q969T9 261 aa18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 CCDC47Q96A33 483 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-223ENST00000600552 SMOQ99835 787 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms