RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 TLR8Q9NR97 1041 aaKnown RBP14.56□□□□□ -0.08
SNRPA-208ENST00000600456 GMIPQ9P107 970 aa14.56□□□□□ -0.08
SNRPA-208ENST00000600456 GREB1Q4ZG55 1949 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 DPYSL4O14531 572 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 TEX33O43247 280 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 OLFM2O95897 454 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 CKMP06732 381 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 HDCP19113 662 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 CLCN1P35523 988 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 VIPR2P41587 438 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 TKTL1P51854 596 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 JAM2P57087 298 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 NR1I3Q14994 352 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 HECTD3Q5T447 861 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 MFSD6LQ8IWD5 586 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 SCML4Q8N228 414 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 SECISBP2LQ93073 1101 aaKnown RBP14.55□□□□□ -0.08
SNRPA-208ENST00000600456 HSFY1Q96LI6 401 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 SPAG5Q96R06 1193 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 RPP25Q9BUL9 199 aaKnown RBP14.55□□□□□ -0.08
SNRPA-208ENST00000600456 SLC2A4RGQ9NR83 387 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 TDP1Q9NUW8 608 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 CHORDC1Q9UHD1 332 aaPredicted RBP14.55□□□□□ -0.08
SNRPA-208ENST00000600456 PCDHGC3Q9UN70 934 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 ARHGAP26Q9UNA1 814 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 PATJQ8NI35 1801 aa14.55□□□□□ -0.08
SNRPA-208ENST00000600456 C2orf78A6NCI8 922 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 HEPACAM2A8MVW5 462 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 TULP2O00295 520 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 EPHB6O15197 1021 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 ZBED1O96006 694 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 ABL1P00519 1130 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 OAS1P00973 400 aaKnown RBP14.54□□□□□ -0.08
SNRPA-208ENST00000600456 CALCAP01258 141 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 PNMA6AP0CW24 399 aaPredicted RBP14.54□□□□□ -0.08
SNRPA-208ENST00000600456 TCF3P15923 654 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 PSMC3P17980 439 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 KRT9P35527 623 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 STAT1P42224 750 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 GPD2P43304 727 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 SLC7A9P82251 487 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 PFKPQ01813 784 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 FCHO2Q0JRZ9 810 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 PM20D1Q6GTS8 502 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 DENND1BQ6P3S1 775 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 VITQ6UXI7 678 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 SLC47A2Q86VL8 602 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 SIX6OS1Q8N1H7 587 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 ARL14EPQ8N8R7 260 aaPredicted RBP14.54□□□□□ -0.08
SNRPA-208ENST00000600456 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
SNRPA-208ENST00000600456 NAP1L5Q96NT1 182 aaPredicted RBP14.54□□□□□ -0.08
SNRPA-208ENST00000600456 TRMT61BQ9BVS5 477 aaKnown RBP14.54□□□□□ -0.08
SNRPA-208ENST00000600456 LHX5Q9H2C1 402 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 ACP6Q9NPH0 428 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 NLRC4Q9NPP4 1024 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 CYLDQ9NQC7 956 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 CNGB3Q9NQW8 809 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 CLIC5Q9NZA1 410 aa14.54□□□□□ -0.08
SNRPA-208ENST00000600456 FBXO21O94952 628 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 TPM3P06753 285 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 CYP11B1P15538 503 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 SOX5P35711 763 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 ACADSBP45954 432 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 RPL34P49207 117 aaKnown RBP14.53□□□□□ -0.08
SNRPA-208ENST00000600456 UBASH3AP57075 661 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 SIGLEC14Q08ET2 396 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 ADIGQ0VDE8 80 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 PMF1Q6P1K2 205 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 KLHDC10Q6PID8 442 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 TRIM67Q6ZTA4 783 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 CACNA2D4Q7Z3S7 1137 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 YAF2Q8IY57 180 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 ZNF276Q8N554 614 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 KIAA1958Q8N8K9 716 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 ST13P5Q8NFI4 369 aaPredicted RBP14.53□□□□□ -0.08
SNRPA-208ENST00000600456 BPIFB1Q8TDL5 484 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 RSPRY1Q96DX4 576 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 SLC22A12Q96S37 553 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 CYP2S1Q96SQ9 504 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 CDK5RAP1Q96SZ6 601 aaKnown RBP14.53□□□□□ -0.08
SNRPA-208ENST00000600456 PLA2G2FQ9BZM2 168 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 EDEM3Q9BZQ6 932 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 THG1LQ9NWX6 298 aaKnown RBP14.53□□□□□ -0.08
SNRPA-208ENST00000600456 MYO6Q9UM54 1294 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 CEP83Q9Y592 693 aa14.53□□□□□ -0.08
SNRPA-208ENST00000600456 ZNF263O14978 683 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 SART1O43290 800 aaKnown RBP14.52□□□□□ -0.09
SNRPA-208ENST00000600456 COCHO43405 550 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 TLR5O60602 858 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 RALAP11233 206 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 SNX16P57768 344 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 GPC5P78333 572 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 PLCB2Q00722 1185 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 ARHGAP29Q52LW3 1261 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 FIGNQ5HY92 759 aa14.52□□□□□ -0.09
SNRPA-208ENST00000600456 SCD5Q86SK9 330 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms